Gene Veis_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1508 
Symbol 
ID4695143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1690304 
End bp1691434 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content69% 
IMG OID639849273 
ProductABC transporter related 
Protein accessionYP_996286 
Protein GI121608479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTTG AGTTGTCCCG CCTCGAAGTG CGCCATGCAG GCCATGCGCA GGCGGCGGTG 
CAAGCGCTCA CGCTGGCTCT GCGCGCAGGC GATATCGGTG TGCTGATCGG CCCCTCGGGC
TGCGGCAAGA CCAGTTTGCT GCGCGCCGTG GCGGGGCTGA CGCCGGTGTC CGGCGGCGAG
ATCCGGCTCA GCGGGAGCCT GGTCGGCAGT GCCGCGCTGA GCGTGCCGCC CGAACTGCGG
CGCATCGGGA TGGTGTTTCA GGACTATGCG CTCTTTCCCC ACCTGAGCGT TGGCCGCAAT
GTGGCCTTTG GCATTCACCG GTTGCCCCGC GCCGAGCAGG CCGCGCGCGT GGCCGAGGTG
CTGCGCTTGG TGGGGCTCGA TGGCTGCGAG AACCGCTTTG CCCATGAACT CTCGGGCGGG
CAGCAGCAGC GCGTGGCGCT GGCGCGCGCG CTGGCTCCAC GCCCCCGGCT GATGCTGCTC
GACGAGCCGT TTTCCAGCCT CGATGTCGAC CTGCGCGAGC GCCTGGCGCA CGAGGTGCGC
GGCATTCTGA AAGCGGCGGG CACCACGGCG CTGCTCGTGA CGCACGACCA GTTCGAGGCC
TTTGCGCTGG GCGATGTGAT CGGCGTGATG CACGAAGGCC AATTGCACCA GTGGGCCGAC
GCCTACACCC TGTACCACCG CCCCGCCACG CGCTTTGTCG CCGACTTCAT CGGCCATGGC
GTGCTGGCCC CGGCGACGCT GGTGCAACGC GGGGGGCACG TGGTGGCGCA GACACCACTG
GGTGATCTGG TGGCGCAGAC ACCATTGGGT GATCTGGTGG CGCAGACACC ACTGGGCGAC
TCGGTGGCAC AAACACCCAC CCCACTGGAC GAACGGTCGG CGCAGACATC GCCGGGCGCA
TGCGATGTGC TGCTGCGCGC AGACGACATC GTGCACGACG ACCGGGCGCC GCTGCAGGCG
CAGATCATGC GCAAGTCGTT CCGGGGCGCG GAGTTTCTGT ACACCTTGCG CCTGGCCAGC
GGCCAGCACC TGCTGGCCCA TGTGCCCAGC CACCACGACC ACGCATTGGG CGAGTGGATC
GGCATCCGCG CGCAGGTAGA CCATGTGGTG ACTTTTCCAC GGGCGCCATG A
 
Protein sequence
MFLELSRLEV RHAGHAQAAV QALTLALRAG DIGVLIGPSG CGKTSLLRAV AGLTPVSGGE 
IRLSGSLVGS AALSVPPELR RIGMVFQDYA LFPHLSVGRN VAFGIHRLPR AEQAARVAEV
LRLVGLDGCE NRFAHELSGG QQQRVALARA LAPRPRLMLL DEPFSSLDVD LRERLAHEVR
GILKAAGTTA LLVTHDQFEA FALGDVIGVM HEGQLHQWAD AYTLYHRPAT RFVADFIGHG
VLAPATLVQR GGHVVAQTPL GDLVAQTPLG DLVAQTPLGD SVAQTPTPLD ERSAQTSPGA
CDVLLRADDI VHDDRAPLQA QIMRKSFRGA EFLYTLRLAS GQHLLAHVPS HHDHALGEWI
GIRAQVDHVV TFPRAP