Gene Veis_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1362 
Symbol 
ID4692716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1523967 
End bp1524722 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content62% 
IMG OID639849131 
ProductABC transporter related 
Protein accessionYP_996145 
Protein GI121608338 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.58229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC CTCCACTCGA ACTCCACGGC CTGCACAAGA CTTTCGGCGC ACTGGCCGTC 
ACGCGTGACG TGAATCTCAG CCTGGCACAC GGAGCGCGGC ATGCCTTGAT CGGTCCGAAT
GGGGCGGGCA AGAGCACGCT GATCAATCTC ATTACCGGCG TACTTTCGCC GACGGCAGGA
CGTGTGTCGA TTGCAGGACA GGACGTCACG AAGCTGTCGT CCGATCGGCG CGTCAAGTTG
GGGCTGGCGC GGACGTTCCA AATCAATTCT CTGTTCATGC GGCTGACCGT TGCGGAAAAC
ATCGGGCTCG CCCTCGCTGC ACGCCACGGA TTGGATGGTC GAATTGGCAG GCCCCTTGCG
CGGCGGGAAG CACTGGTGGC AGAAGCTGCC GAGGGGCTTC GCACCTTGGG GTTGCTCGAT
CTCGCAGGGC GCCGTATCAA CGAGCTGGCC TACGGTCAGC GACGCCAGGT CGAGATCGCG
CTGGCGCTGG CGCTCAAGCC GAAAGTTCTG CTCCTCGACG AGCCAGTCGC CGGCGTCCCG
TCCACCGAGG GCAAACGCCT ATTTCAGTTG CTCGAAAGAC TGCCCGAGGA TGTCGCAGTG
CTCGTGATCG AGCATGACAT GGACTTGGTA TTTCGCTTCG CCAAGCGCAT CACAGTCCTT
GTTGAAGGCG GCATCCTGGT GGAAGGCAGC GTCAGCGACA TTCGCTCGGA TCCGCACGTC
CGAGACGTTT ATTTGGGCAA GCGCGGCCAT GACTGA
 
Protein sequence
MSAPPLELHG LHKTFGALAV TRDVNLSLAH GARHALIGPN GAGKSTLINL ITGVLSPTAG 
RVSIAGQDVT KLSSDRRVKL GLARTFQINS LFMRLTVAEN IGLALAARHG LDGRIGRPLA
RREALVAEAA EGLRTLGLLD LAGRRINELA YGQRRQVEIA LALALKPKVL LLDEPVAGVP
STEGKRLFQL LERLPEDVAV LVIEHDMDLV FRFAKRITVL VEGGILVEGS VSDIRSDPHV
RDVYLGKRGH D