| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1184 |
|---|
| Symbol | |
|---|
| ID | 4691442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1313947 |
|---|
| End bp | 1317912 |
|---|
| Gene Length | 3966 bp |
|---|
| Protein Length | 1321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848960 |
|---|
| Product | helicase domain-containing protein |
|---|
| Protein accession | YP_995974 |
|---|
| Protein GI | 121608167 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0342603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG CCAACGCATG GATCGCCATC GATCACGGTC GCGGCACCGA TCGCAGGCTC
GCGCCCTACA CCCTGGTCTT GAAGGGTGAC CGATCCCTGT ATCAGGCCAT CGCCGAAGAC
GATTGGGTGC TCGTGCTGAA TTCTGCCGGG GAGATCGCTC GCGCCGGGCG TGTGCTGCGG
CTTCGTTCCG ACCTCGAAAC CACCACGATC TTCTTCGACC GGCTGTCCGC CGCTGACGCT
CCGGTGCCGG TCACCAGCGT TTCTCTGGCT CCCCCGTCGT CGGGCAACGT CGGGCGCATC
CAGTGGGACG AGTTCGTCGC GGCCTTGTCC ACGGCGCTGC ACCAGACCGT CACCGGCATG
CTGCCGGTCG AGGATCCGGC CTACATCCGT GAACTGCTGC AACTGGCCGT GGTGGACGAC
CTGCTCGGCC CGGCGGGTGG CCCACACGAA CGCATCGTGG ACATGGGCGT GCGCGACCGT
TATCTGGTCG GCAAGTTGGC GCCGCGTGAT GATGCTCAGG GAGGCATCGA AGGGCCGGAA
GGCCCGCTGG CTGAGGAAGA TGTGGAGGAA CCCACCGACC CCATCGTGCC CGGCCAGCAC
GAACCCGGTG CCGAGTTCGG TACGGCGACG GGGCGAGTGG AACCCGAGTC GGACGGTTCG
GACGAAATCG ACGCGGCCAG CAATCAGTCG CTGGTGCCCA GCAGCTTCGG CATGACCTTC
TGCGTGGATG GCGACGTCGA GCGCATCGAG GTCGAGGCGC GCTGGGGCAG CTACGAGCGC
GTGCCGAACG AGGAACACGA GCTGGCGCGG CCCAATGGGC AGAAGGCCAA GGTCTGGCTG
CGTATCCCTT GCGGCGGGAA GCTGGTGTTG TCGCTCACCG AGGGCGTGGT TCCCCATCAG
GCACCGGATG CGAACCGTCC GGCGGTGCGG ATACAGGGTT CCGTCCGCGC CAAGAACGCC
AATGGCGACC GCTTGGTGAC GCTGTTCTTG GTGAATGCGC AGGAGGAGCC CGACACCAAC
CGCGATACGG CCTGGCTGTT CCAGCCGGAA CTGATCGTGC GCGCAGAAGC CGAGGCGTCC
AAGCGCGTCA TCTTCCGCCG CCGCCCCGTG CTTGATGCCG ACGGGAACGA CCCGGAGCGC
GAATCGCTGG AGATGATCTA CCGCAATCGC GTGGAGTTCG CGGTCGGGCA TGGCGTCGCC
GTCCACGCCG AGACGGCGGA CGACGTGACG CTGGCCACCG AGGTGCGCAC CACCGTGCTG
CCGCAGTACG AAGTGCAGGT CACGGAGACG CCGGGCCTCG ACCCCGCCGA CCGTCCGGCG
ATGAAGGAGA TGCTGGCGAG CGGCCTGCTC GACATGCAGC GGCTCGCCAC GCTGGAAGTC
GCCGAGTTGG TCGATGCCCT GAATGTGCTG ACGAAGGACT ACGCGGCGTG GATCGTGGAG
CAGCGCGAGC GCATCGACGT GGTCGGGTAT GACACGCAGG CCGCACAGGC GCTGGATCGC
TGTCAGGAAA TCCAGTCGCG CTTGCAACAG GGCATCGACA CGCTGAAGAA CGACGGCAAG
GCGCTGGCCG CATTCCGCTT CGCCAATAAA GCAATGGCGA TCCAGCGTGT GCGCAGCCAG
TACGCGCTCG AAGTGCGGCG CGGGCGTGAC GTGACGGTCG ATCAGTTCGA CCAGCCGAAG
AACCGGAGCT GGCGTCCGTT CCAGTTGGCG TTCCTGCTGC TGGCTATCCC GTCGCTGGCC
GATCCCATGC ACCCCGATCG CGTGCAGCCG ATGGAAGCCC ATGCCGATCT GCTATGGTTC
CCCACCGGCG GCGGCAAGAC CGAAGCCTAT CTGGGCGTCG CGGCGTTCAC GATGGCGATC
CGCCGTCTGC AAGGCAAGCT CGGCGGCTAC GACGGCTTGC GCGGTCTGGC GGTGATCATG
CGCTATACGC TGCGCCTGCT GACCTTGCAG CAGTTCCAGC GCGCCACTGC GCTGATCTGC
GCGATGGAAA AACTTCGGCG GGATGCTCTC GTTCGAGGTG ACGAGTCGCT CGGCAAGGAA
CCTTTCACCA TCGGCCTGTG GGTCGGCAAC AAGGTGACGC CGGGCACGAC CGAGGACAGC
CACCGGGCCA TCCAGGCTCT GCGTGATCCA GGAAAGAACA AAGCAGGACG TGCTTCACCA
CTTCAGCTCA CCAGTTGCCC TTGGTGTGGC TCCACGATCG ACCCCGGAAA AGACGTCGTC
GTCGATAAGG ATCGCGGTAG AACGGTCGTT TACTGCGGTG ACAAAAAGAG CAGTTGCACA
TTCTCTCGCG GCAGATCGAG CAAGTCGCCG CACCCCGGCA TCCCGGTGCT GACGGTGGAT
GAGGAGATCT ACCACCGTCC GCCGACGATG ATGATCGCCA CCGTGGACAA GTTCGCCATG
ATGGCGTGGC GCGGCCAGGT GCGCACGCTG TTCGGTCGCG TGAGCCAGGA ATGCGAGCGC
CACGGCCTGC TGTGGCCTGA CTGCGATTGC ACGGGCAATC ACCCCGCGTC GAAAAATTCG
CCAGCGGTCA AGGTCAAGAA CGTCGCACCA ATCCGTCCGC CCGATCTGAT CATCCAGGAC
GAGTTCCACC TCATCAGCGG CCCGCTGGGC ACGATGGTCG GCTTGTACGA ATCCGTTGTC
GATGAACTGT CTGGCTGGAC GCTCGATGGC AAGACGGTCA AGCCCAAGAT CGTCGCGTCC
ACGGCGACGG TGCGCAAAGC CAAGGAACAG GTGAACAACG TGTTCATGCG GCGCGTGTCG
GTGTTCCCGC CGCATGGCTT GGACGTGGAG GACAACTACT TCTCGGTGCA GCGCCCGATC
GAGGAACGGC CCGGACGGCG CTATCTGGGC GTGTGCTCGC CCGGCAGCTC GCGTCCCGCG
ATGCTGATCC GCGTCTATAC CGCCTTCCTC ACCGCCGCCC AGGCCCTGTT CGACCGTTTC
GGCGAACCCG CCGATCCGTA CATGACGACG GTCGGCTACT TCAACTCGCT GCGTGAGCTG
GGCGGGATGC GGCGCTTGGC AGAGGACGAC GTGCAGACGC GCGCCTACCG TGTTCGGATG
AGCATGGTCG ATCGGCCTGC GCTCGCGCAG CGCAGCGTCA ACAACATCCG CGAGCTGACG
TCGCGCGTCT CCAGTCAGGA CATCCCGAAG TACCTCGACG ATCTGGAAGT CAAGTTCAAG
GCCGCGTTCG ATCCGGCCAC CGGGAAGTTC GTGACGAAGT GGAACCAGGG CGATACCCGC
GCGATCGACG TGGTGCTGGC GACCAATATG CTGTCGGTGG GTCTGGACGT GAACCGGCTG
GGCCTGATGG CGGTCAACGG TCAGCCCAAG GGCACGGCGG AATACATCCA GGCCACCAGC
CGCGTGGGCC GTTTCTTCCC CGGCTTGGTC TGCACGGTGC TCACCTGGGC GCGTCCGCGC
GACCTCTCGC ACTACGAGAC CTTCGAGCAT TACCACGCGA CCTTCTACAA GCATGTGGAA
GCGCAGTCGG TGACGCCGTT CTCGCCGCGC GCGATGGATC GCGGCCTGAC CGGCGCGCTG
CTCGCCCTGA TGCGGCTGGA GAACGGCGCC TTCAGCCCGA ACGCGGGTGC GGGTGAACTG
GACAAATCCG ACAAACCCGA GATCCTCGAT GCCATCGACG TGCTGGTGCG GCGGGCTTGG
AACGTCAGCG AAACGACCAC CATCGAGCAT CTGGCCGAGC GTGAACTGAA GGAACGCGCG
GACGAATGGG CCAAGGCTGT GAGCGTGCCT GGTCGCACGC TGGTCTACGA AAAGCCAGGG
GCGCAGGCAG CGACGATGGT CGGACTGGTC AAGTCGCCGG GCATCCATGC GTGGGACAAC
TGGACGGTGC CGATGTCGAT GCGCGAAGTG GAGCCGGGCG TGCGCCTGAT CATGAACACG
GAGCGCATCC CGGACGAGCA CGGGTGGAAG CCGCGTCCGG TGCCGAAGGA CGAGGACCGA
CCATGA
|
|---|
| Protein sequence | MSDANAWIAI DHGRGTDRRL APYTLVLKGD RSLYQAIAED DWVLVLNSAG EIARAGRVLR
LRSDLETTTI FFDRLSAADA PVPVTSVSLA PPSSGNVGRI QWDEFVAALS TALHQTVTGM
LPVEDPAYIR ELLQLAVVDD LLGPAGGPHE RIVDMGVRDR YLVGKLAPRD DAQGGIEGPE
GPLAEEDVEE PTDPIVPGQH EPGAEFGTAT GRVEPESDGS DEIDAASNQS LVPSSFGMTF
CVDGDVERIE VEARWGSYER VPNEEHELAR PNGQKAKVWL RIPCGGKLVL SLTEGVVPHQ
APDANRPAVR IQGSVRAKNA NGDRLVTLFL VNAQEEPDTN RDTAWLFQPE LIVRAEAEAS
KRVIFRRRPV LDADGNDPER ESLEMIYRNR VEFAVGHGVA VHAETADDVT LATEVRTTVL
PQYEVQVTET PGLDPADRPA MKEMLASGLL DMQRLATLEV AELVDALNVL TKDYAAWIVE
QRERIDVVGY DTQAAQALDR CQEIQSRLQQ GIDTLKNDGK ALAAFRFANK AMAIQRVRSQ
YALEVRRGRD VTVDQFDQPK NRSWRPFQLA FLLLAIPSLA DPMHPDRVQP MEAHADLLWF
PTGGGKTEAY LGVAAFTMAI RRLQGKLGGY DGLRGLAVIM RYTLRLLTLQ QFQRATALIC
AMEKLRRDAL VRGDESLGKE PFTIGLWVGN KVTPGTTEDS HRAIQALRDP GKNKAGRASP
LQLTSCPWCG STIDPGKDVV VDKDRGRTVV YCGDKKSSCT FSRGRSSKSP HPGIPVLTVD
EEIYHRPPTM MIATVDKFAM MAWRGQVRTL FGRVSQECER HGLLWPDCDC TGNHPASKNS
PAVKVKNVAP IRPPDLIIQD EFHLISGPLG TMVGLYESVV DELSGWTLDG KTVKPKIVAS
TATVRKAKEQ VNNVFMRRVS VFPPHGLDVE DNYFSVQRPI EERPGRRYLG VCSPGSSRPA
MLIRVYTAFL TAAQALFDRF GEPADPYMTT VGYFNSLREL GGMRRLAEDD VQTRAYRVRM
SMVDRPALAQ RSVNNIRELT SRVSSQDIPK YLDDLEVKFK AAFDPATGKF VTKWNQGDTR
AIDVVLATNM LSVGLDVNRL GLMAVNGQPK GTAEYIQATS RVGRFFPGLV CTVLTWARPR
DLSHYETFEH YHATFYKHVE AQSVTPFSPR AMDRGLTGAL LALMRLENGA FSPNAGAGEL
DKSDKPEILD AIDVLVRRAW NVSETTTIEH LAERELKERA DEWAKAVSVP GRTLVYEKPG
AQAATMVGLV KSPGIHAWDN WTVPMSMREV EPGVRLIMNT ERIPDEHGWK PRPVPKDEDR
P
|
|---|
| |