Gene Veis_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0999 
Symbol 
ID4693247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1112132 
End bp1113016 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID639848777 
Productpolysaccharide deacetylase 
Protein accessionYP_995794 
Protein GI121607987 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.289502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG AAATTTTGTG CGGCTTCGGC GTCGACGTGG ATGCCGTCGC CGGCTGGCTG 
GGCTCGTATG GCGGCGAGGA CTCGCCGGAC GACATCTCGC GCGGCCTGTT CGCCGGCGAG
GTCGGAGCAC CGCGCCTGCT GCGGCTGTTC GAGCGCCTGG GGATTCGCAC CACATGGTTC
ATACCCGGGC ATTCGATAGA GACCTTCCCG AGCCAGATGC GCGCGGTCGC CGAGGCCGGG
CATGAAATCG GCATCCATGG CTACTCGCAT GAGAACCCGA TCGCGATGAC GGCGGTGCAG
GAGGAAGCGG TGCTGGACAA ATGCATAGAC TTGGTACAGG CACTGTCCGG CAAGCGCCCC
ACCGGTTACG TCGCCCCCTG GTGGGAGTTC TCGGCCGTCA GCAACGAACT GCTGCTCAAG
AAGGGCATCA AGTACGACCA CTCGTTGATG CACAACGATT TTCATCCGTA CTATGTGCGC
GTGGGCGACA GTTGGACCAA GATCGACTTT GGCAAACCGG CGGCCGAATG GATGAAGCCG
CTGCGCCGTG GCACCGAATC GCGCCTGATC GAGATCCCCG GGAACTGGTA CCTCGATGAC
CTGCCGCCGA TGATGTTCAT CAAGAAGTCG CCCAACAGCC ATGGCTTCGT GAACCCGCGC
GACATCGAGC AACTGTGGCG CGACCAGTTC GACTGGGTCT ACCGTGAGCT GGACTACGCG
GTGTTTCCGA TCACCATCCA TCCGGATGTC TCTGGCCGGC CGCAGGTATT GCTGATGCTC
GAGCGCCTGT TTGCCCACAT GAGCGCGCAC CCGGGCGTGC GCTTCGTCAC GCTCGATGAA
ATGGCCGACG ATTTCGCGCG GCGCCAACCG GCCCCGGCGC CCTGA
 
Protein sequence
MAKEILCGFG VDVDAVAGWL GSYGGEDSPD DISRGLFAGE VGAPRLLRLF ERLGIRTTWF 
IPGHSIETFP SQMRAVAEAG HEIGIHGYSH ENPIAMTAVQ EEAVLDKCID LVQALSGKRP
TGYVAPWWEF SAVSNELLLK KGIKYDHSLM HNDFHPYYVR VGDSWTKIDF GKPAAEWMKP
LRRGTESRLI EIPGNWYLDD LPPMMFIKKS PNSHGFVNPR DIEQLWRDQF DWVYRELDYA
VFPITIHPDV SGRPQVLLML ERLFAHMSAH PGVRFVTLDE MADDFARRQP APAP