Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0999 |
Symbol | |
ID | 4693247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1112132 |
End bp | 1113016 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639848777 |
Product | polysaccharide deacetylase |
Protein accession | YP_995794 |
Protein GI | 121607987 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.289502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAAG AAATTTTGTG CGGCTTCGGC GTCGACGTGG ATGCCGTCGC CGGCTGGCTG GGCTCGTATG GCGGCGAGGA CTCGCCGGAC GACATCTCGC GCGGCCTGTT CGCCGGCGAG GTCGGAGCAC CGCGCCTGCT GCGGCTGTTC GAGCGCCTGG GGATTCGCAC CACATGGTTC ATACCCGGGC ATTCGATAGA GACCTTCCCG AGCCAGATGC GCGCGGTCGC CGAGGCCGGG CATGAAATCG GCATCCATGG CTACTCGCAT GAGAACCCGA TCGCGATGAC GGCGGTGCAG GAGGAAGCGG TGCTGGACAA ATGCATAGAC TTGGTACAGG CACTGTCCGG CAAGCGCCCC ACCGGTTACG TCGCCCCCTG GTGGGAGTTC TCGGCCGTCA GCAACGAACT GCTGCTCAAG AAGGGCATCA AGTACGACCA CTCGTTGATG CACAACGATT TTCATCCGTA CTATGTGCGC GTGGGCGACA GTTGGACCAA GATCGACTTT GGCAAACCGG CGGCCGAATG GATGAAGCCG CTGCGCCGTG GCACCGAATC GCGCCTGATC GAGATCCCCG GGAACTGGTA CCTCGATGAC CTGCCGCCGA TGATGTTCAT CAAGAAGTCG CCCAACAGCC ATGGCTTCGT GAACCCGCGC GACATCGAGC AACTGTGGCG CGACCAGTTC GACTGGGTCT ACCGTGAGCT GGACTACGCG GTGTTTCCGA TCACCATCCA TCCGGATGTC TCTGGCCGGC CGCAGGTATT GCTGATGCTC GAGCGCCTGT TTGCCCACAT GAGCGCGCAC CCGGGCGTGC GCTTCGTCAC GCTCGATGAA ATGGCCGACG ATTTCGCGCG GCGCCAACCG GCCCCGGCGC CCTGA
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Protein sequence | MAKEILCGFG VDVDAVAGWL GSYGGEDSPD DISRGLFAGE VGAPRLLRLF ERLGIRTTWF IPGHSIETFP SQMRAVAEAG HEIGIHGYSH ENPIAMTAVQ EEAVLDKCID LVQALSGKRP TGYVAPWWEF SAVSNELLLK KGIKYDHSLM HNDFHPYYVR VGDSWTKIDF GKPAAEWMKP LRRGTESRLI EIPGNWYLDD LPPMMFIKKS PNSHGFVNPR DIEQLWRDQF DWVYRELDYA VFPITIHPDV SGRPQVLLML ERLFAHMSAH PGVRFVTLDE MADDFARRQP APAP
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