| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0905 |
|---|
| Symbol | |
|---|
| ID | 4694947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1006540 |
|---|
| End bp | 1007265 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848679 |
|---|
| Product | regulatory proteins, IclR |
|---|
| Protein accession | YP_995702 |
|---|
| Protein GI | 121607895 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.712353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.790003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGGG CGCTGCAACT GTTGCGCCGG GTTGCGAAAA GCAATGACCG AGGGGTCCGG
CTCGCCCAAC TGGTGCGCGA TGAGGGACTC GACCGGGCCA CCACCTACCG GCTGATGAGT
TGCCTGGTCG AAGAACAGTT CGTCGACCGG GACAGCGAGC ACCTGTACCG CCTTGGCCCG
GAGGCGGTGC TGCTCGGCTC GCTGCTGCCG CAACCCACGC CGTTGCTGCG CCGCTTCGTG
CCCGTCATGA AGCGCATCGG GCGCATCGCC GGCGACACCG TCTTCCTGAT GATGCGGCAG
GGCGATTTCG TTTACTGCGC GCACCGGGAA GAGGGCCACT CCCCGATCAA GATCCTGACC
ACCAGCATCG GCCAGAGACG CCTGCTCGGC ACAGGCACCG GCGGCACGGC GGTGCTGGGC
CTGATGGACG AAGCCGAGGT GGCAGGCACC TTTGCCCGCA ACTCGACGGC TTACGCCGAA
CACCGGATCA GCCTGGATCG ACTGCAGGCG TTGGGCACGG CAGTGCGCGA GCAGGGCTGC
GCGCTGGTCT TCGATTCATT CGGAGAAACC GGCGTCGCCG GGCTGGGTAT TGCGTTCCGC
ATGGGCAAGC ACGGCATGGG CGCCATCAGC GTCGCCACGC TGACCGCGCG CTTCGGCTTC
GAGCGGCAGC ACAGGGTGCG ACAGTTGGTC GAGACCGAAC TGCGCGGGCT GGGTCTGCAC
GCATGA
|
|---|
| Protein sequence | MRRALQLLRR VAKSNDRGVR LAQLVRDEGL DRATTYRLMS CLVEEQFVDR DSEHLYRLGP
EAVLLGSLLP QPTPLLRRFV PVMKRIGRIA GDTVFLMMRQ GDFVYCAHRE EGHSPIKILT
TSIGQRRLLG TGTGGTAVLG LMDEAEVAGT FARNSTAYAE HRISLDRLQA LGTAVREQGC
ALVFDSFGET GVAGLGIAFR MGKHGMGAIS VATLTARFGF ERQHRVRQLV ETELRGLGLH
A
|
|---|
| |