Gene Veis_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0641 
Symbol 
ID4693196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp716290 
End bp716814 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content65% 
IMG OID639848418 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_995442 
Protein GI121607635 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.974192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTCCA CCAAGTTCGT GACAGCGTGC TACATCCTGT CGTTCGTGAC CTACCACGGC 
CCGGACATGA TCCCGACCCA AACCATCGCC AAGTGGGTCA ACGTCAATGC ATCGCGCGTG
CGGCAGATCG TGGCGCGGCT CGTTCGCGCG GGCCTCCTGG CATCGACCCG CGGCGGAGAG
GGCGGCGTGG TGATTGGCCG GGCCCCGTCA GACATCACGC TGCTGGACGT TTTCGACGCC
GTGGCCGAAC AGGATACGGC GCTCTTTTGC GTCGACAACC CGTTCTCCGA CTGGAAGGAT
CGCTGCCGCG TGCACTCCGT ACTCACCACC ATGCGCGGCG AACTGGAGCG CGATTTCCGT
AGCAAGCTGG CGAACACACC CATGACCTCG CTCTACGCAC CGCCGCCCGA GGTGCATGCA
GGCTCTCCGG CCAAGAAGAC CGTCAAGGCC GCGACGAAGA AGGCGGCAGC TTCGACGCCG
AAGAAGCGCG TCCCGGGTTC GGCTCGGGCA GGGGCGGCAA AGTGA
 
Protein sequence
MKSTKFVTAC YILSFVTYHG PDMIPTQTIA KWVNVNASRV RQIVARLVRA GLLASTRGGE 
GGVVIGRAPS DITLLDVFDA VAEQDTALFC VDNPFSDWKD RCRVHSVLTT MRGELERDFR
SKLANTPMTS LYAPPPEVHA GSPAKKTVKA ATKKAAASTP KKRVPGSARA GAAK