| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0633 |
|---|
| Symbol | |
|---|
| ID | 4691301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 707436 |
|---|
| End bp | 709112 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848410 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_995434 |
|---|
| Protein GI | 121607627 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5305] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.566084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.651283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA AAGAACCAAT TTACCGTGGC CATCGTCCAC GCCGCCAGAT GGCACTCTGG
CTGGGATTTT TCGTCGCTCT GGCCGCTTTG ACGCTGTATT TGCGCTTTCA TGAACTGGCG
ACGCAAGGTT TGTGGTCCGA CGAGCTGTTT TCGGTCTCCT CCATCACGCA GGTGGGCGCG
GGCCGGCCTT GGTATGCGTA TGAGAAAAAG TCTTTTCCGT ATCTGCGGAT GGAGGATTCT
TTCCTGACCT GGAAGGCCGG CGAGAATTCG CCGCCGTTGT TCGAGGTCCT GCTGTGGCTT
TGGTGTCAGG TGTTCGGCTG GTCGGATTTC GCCGTGCGCT CGATGAGCGC GCTGCTGGGC
AGCCTGGCGC CGCTGGTTCT GTTCATCGGC CTGCGGCGCC CTCTGGGGGC CTGGTCGGCT
GCCGGCGCGG CCCTGATCTT CGCGCTGTCG CCGTCCGCCG TCACCTATGC GCAGGAGGTG
CGCGGCTACG CCCTGCTGAT GCTGCTGGCC AGCATCGCCG TGGTGCGGCT GGTGCGCTAC
GTGCTGGCGG ACGACGGTCA GCGCAGCCAT TGGGGGAGCA GTTTCAAAGT GGATGTCGCG
ATCTATCTGC TGCTCAGTTA CACGCATTAC ACGGGGCTGG TGCTGGCCTG CGGCTTGACG
GGCCTGCGCT GGGTGCTGGC CAAGCGGCGG GGGTGGCCGC TGCGCGAGTT CGGCTGGTTC
GCCGCGCTGC CTGCGCTGTT GGCGCCCTGG CTGTATCTGA ATTGGTTCGC CATGGCGTCC
GCCGGCGCGG GCTATTACGG CTGGAGCGAC TATGCCTGGG CCGATGTCTG GTCTTTGCTG
CTGCCCAAGG CGACAGAGTT TTTTCTGCCG CAACCGTCCA TACAGGTGGT ACAGGCATTC
ATCGGGCTGC CCAAGGCGGT GGGGGTTTTT CTGGCGCGGC CCTATGCGCT GCCTGCCACT
TTGACTCTGG CCTTGCTCGG CGCCGCCCTG GGGGCATGCA AGCGCGCGGC CGCAGACGCC
GCGCCGCGCC GCGTGCACGA CCCGCGCTGG CTGCTGTGCC TGGGCTTGGC GCTCCTGGTG
GTCATGCATT TTGGCTACGG CATCTACACG GCATTCCATG CCCGGGTTTG GCATGCGCGC
TATTTTTCGG CCATGCTGCC GGTGGGCATG GCGGTGTTTG CGTTGCTGTT TTCACTGGCC
GGGCAGCATC GCCTGGCGCG CCTGTTTCCG CTGTGCGCGG TGCTGCTGGC CTGCGCCGTC
AGCGTGCCGA CGCTGCGGGC GTACTACCAG AACCCCTGGA AGGAGGACTA CCGCGAGGCA
TCGCGGTATA TCGTGCAAAA CACGCAGGGC CGGCCTACGG TGGTGGCCAC CTGGGCCGCC
AATGCCGCTT ATTACAACTA CTACCTGCGC CGCTTCATGG CCGATGCGGG GCGCAGTTAC
GAGTTGACGA CGGTGGGGCA GTCGGGGGAC CTGACGGCGG GCGTGGCGGC ACTGTGCCAG
CGCCGCTGGG CCCCCGGTGA ACAGGTGGTG CTGTTCCAGC ACAGCGCGCA CCGCCTGTAC
TTCGACATGG TGAACCGCCA TTGCGCGGGG GCGCTGCAGA TGGTGTCGGA GCGCCAGTTT
CGCGGGCTGT TCGTCAACTT TTACCAGGCC ACGGGGGCGG CGGCCTCGCC GCAGTAG
|
|---|
| Protein sequence | MNDKEPIYRG HRPRRQMALW LGFFVALAAL TLYLRFHELA TQGLWSDELF SVSSITQVGA
GRPWYAYEKK SFPYLRMEDS FLTWKAGENS PPLFEVLLWL WCQVFGWSDF AVRSMSALLG
SLAPLVLFIG LRRPLGAWSA AGAALIFALS PSAVTYAQEV RGYALLMLLA SIAVVRLVRY
VLADDGQRSH WGSSFKVDVA IYLLLSYTHY TGLVLACGLT GLRWVLAKRR GWPLREFGWF
AALPALLAPW LYLNWFAMAS AGAGYYGWSD YAWADVWSLL LPKATEFFLP QPSIQVVQAF
IGLPKAVGVF LARPYALPAT LTLALLGAAL GACKRAAADA APRRVHDPRW LLCLGLALLV
VMHFGYGIYT AFHARVWHAR YFSAMLPVGM AVFALLFSLA GQHRLARLFP LCAVLLACAV
SVPTLRAYYQ NPWKEDYREA SRYIVQNTQG RPTVVATWAA NAAYYNYYLR RFMADAGRSY
ELTTVGQSGD LTAGVAALCQ RRWAPGEQVV LFQHSAHRLY FDMVNRHCAG ALQMVSERQF
RGLFVNFYQA TGAAASPQ
|
|---|
| |