| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0536 |
|---|
| Symbol | |
|---|
| ID | 4692264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 604500 |
|---|
| End bp | 605732 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639848314 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_995338 |
|---|
| Protein GI | 121607531 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGC CGCTCGCCGA CGCAAGCGCC GCCGAACCCG CCTTGCTGCG CCAGCGCGGC
TCCAACCATG TCGGGCTGCG CCAGTTCAAC GAGCGCGTGG TGTTGCAGGC GCTGCGCACC
CACGGCAGCC TGGCCAAGGC CGAGATCGCG CGCGTGACCG GCCTGACCGC GCAAGCCATC
GGCCTGATCG CGGCGCGGCT CGACGACGAG CAATTGCTGC GCCGCGAAGC GCCGGTGCGC
GGCCGCGTCG GGCAGCCCTC GGTGCCGATC GGCCTGAACC CCGATGGCGC CTTTGCCGTC
GGCATCAAGA TCGGCCGGCG CAGCGCCGAC TGGCTGCTGG TGGACTTCAG CGGCCAGGTG
CGCGCGCGCA TCCGGCTCGA CTACGCCTTC CCCGACATAG ACCAACTGCT GCCCGCCATT
GGCCGCCACT TGAACCAACT GCTCGACGGC CTGGGGCCGC TGCGCGCGCG CGTGGTCGGC
GTGGGCCTGG CCGCGCCGCT GAAACTCGGC GGCTGGCACC GCATGCTGGG GCTGAGCGCG
GCGCAGTCGC AGGCCTGGAA CAGCATCGAT CTGACCGGGC AGGTGCAGCA AATGACCGGT
CTGCCCGTGC GCTTTGCCAA AGACACCGCC GCCGCCTGCG TGGCCGAGTT GCTGCAAGGC
CGAGGGCGCG ACATCCCGAG CTTTCTGTAC CTGTTCATGG ACACCTTCGT CGGCGGCGCG
CTGGTGCTCG ACTCGCACCT GCACCGGGGC CTGCACGGCA ACGCCGGCGC CGTGGCCTCG
CTGCCGCTGG CCGTGGCGCA GCCAGACAGC GCCGCAGCGC CCGAGCAGCT GATCAGACAG
GCCTCGCTGT GGGAGCTCGA GCAGCGCCTG CGCGAGCAGG GCCTGGACCC GATGGCCGCC
TACGACGAGC GCGTGCTGCA AGCGCCCTGG GCCGCGCACA GCCGGGCCTG GATCGCCAGC
GCCGCCAGCG CGCTGGCGCA TTGCATCGTC TCGGCAACGG CCTTTCTCGA CCTTGATGCC
GTGGTCATCG ACGCCGCCAC CACCGCCGAC CTGCTGCAAG CCCTGGCCGA GCGCGTGCGC
GCGCTGCTGC ACGCCTACAA CTGGGAGGGC CTGCACCCGC CCCCGCCGTT GGCGCTGGGC
TCCATCGGCT CGGACGCCCG CGCGCTGGGC GGAGCGCTGC TGCCGCTGCA TGCCTGCTTT
GCGCCCGATA CCGATATCTT TTTGAAGACC TGA
|
|---|
| Protein sequence | MAMPLADASA AEPALLRQRG SNHVGLRQFN ERVVLQALRT HGSLAKAEIA RVTGLTAQAI
GLIAARLDDE QLLRREAPVR GRVGQPSVPI GLNPDGAFAV GIKIGRRSAD WLLVDFSGQV
RARIRLDYAF PDIDQLLPAI GRHLNQLLDG LGPLRARVVG VGLAAPLKLG GWHRMLGLSA
AQSQAWNSID LTGQVQQMTG LPVRFAKDTA AACVAELLQG RGRDIPSFLY LFMDTFVGGA
LVLDSHLHRG LHGNAGAVAS LPLAVAQPDS AAAPEQLIRQ ASLWELEQRL REQGLDPMAA
YDERVLQAPW AAHSRAWIAS AASALAHCIV SATAFLDLDA VVIDAATTAD LLQALAERVR
ALLHAYNWEG LHPPPPLALG SIGSDARALG GALLPLHACF APDTDIFLKT
|
|---|
| |