| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0485 |
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| Symbol | |
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| ID | 4695185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 550244 |
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| End bp | 551161 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639848264 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_995288 |
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| Protein GI | 121607481 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTT CAAACCCCTC TGCCCCCACG CCGGCGCCGC GCGCCGTGCT GCGCCGGCCC
ACGGCGGCCG CCAAGCCTGC AACGCCGGCA TGTCCGGCGG GCATGGCAGC GGGCGTCGTA
CCGGACGCAG CACGGGGTGC CGTGCCGGGC ACGGCCAACG GCACCGACCG CTTGCGCCTG
AACAAGCGCA TGGCCGAACT CGGCCTGTGC TCCCGGCGCG AGGCCGACGA CTGGATTGCC
CAAGGCCGGG TCCGGGTCAA CGGCCAGGTC GCGCCCATCG GCCTGCGGGT CACGGCCAGC
GACCGCATCG CGGTCGACAA GCAGGCCCGG GGTGCTCAGC GGCAGCGTGT CACCATCTTG
CTGCACAAGC CCATGGGCTA TGTGAGCGGG CAGGCAGAAG ATGGTCATAG GCCCGCCGTG
GCGCTGATCG ACCAGCGCAC ACACTGGCGC GACGACACCA GCCGCAACCG CTTTGCCCCG
GCGCAATTGC GCGGCCTGGC GCCTGCCGGG CGGCTGGACA TCGACTCGGT GGGCCTGCTG
GTGCTCACAC AGGACGGACG GGTGGCGCGC CAGTTGATTG GCGCGGACTC CACGGTGGAC
AAGGAATATC TGGTGCGCGT GCAATACGGC GCCGTGGCCC TGGATGTGCG CTCGGTGTTT
CCGGCCGGGC AGTTGGCCAG TCTGTGCCAT GGCCTGTCGC TGGACGGCCA GCCGCTCAAG
CCCGCCGTGG TCGATTGGCA AAACCCCGAG CAACTGCGCT TTGTGCTCAC CGAGGGCAGG
AAGCGGCAAA TCCGCCGCAT GTGCGCGCTG GTGGGCTTGA CGGTGGTGGG CCTCAAGCGC
GTCCGCATCG GCCGCGTGCG GCTGGGCCTT TTGCCGGCGG GCCAGTGGCG TTACCTTGCG
GCCGACGAGC AGTTTTGA
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| Protein sequence | MSSSNPSAPT PAPRAVLRRP TAAAKPATPA CPAGMAAGVV PDAARGAVPG TANGTDRLRL
NKRMAELGLC SRREADDWIA QGRVRVNGQV APIGLRVTAS DRIAVDKQAR GAQRQRVTIL
LHKPMGYVSG QAEDGHRPAV ALIDQRTHWR DDTSRNRFAP AQLRGLAPAG RLDIDSVGLL
VLTQDGRVAR QLIGADSTVD KEYLVRVQYG AVALDVRSVF PAGQLASLCH GLSLDGQPLK
PAVVDWQNPE QLRFVLTEGR KRQIRRMCAL VGLTVVGLKR VRIGRVRLGL LPAGQWRYLA
ADEQF
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