Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0382 |
Symbol | |
ID | 4691377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 430610 |
End bp | 431338 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639848163 |
Product | TetR family transcriptional regulator |
Protein accession | YP_995188 |
Protein GI | 121607381 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.894324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.190078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCC GTACCCCTAT CGTCAAGCGC AGCGCCCGCC GGACCGCCGC GATCACCGAG GCCGGCCGGC CCGACCGCCG GCAGGCCATC CTGCTGGCGG CCGAAAAGCT CTTCGCGCAG CACGGCTACC ACGCGGTGAC GATCCGCCAG ATCGCCGAGC AAGCCGGTGT GCCGCTGGCG CTGGTGGGCT ATTACTTCGG CCCCAAGCAC GCGCTCTTTC ATGCCATCTT CGAGCACTGG AGCCACACCA TCGACGAGCG GCTGGCCGGC TTGGCTGCGC TGGACAACGA CCCCGATGAT CCGCGCACGC TGGTGCGCAT CATCGAGGTC TTCACCGGCC CGGTGCTGGC CCTGCGCGCG GGCGCCGAGG GCGAGTACTA CGCGCTGCTG GTCTCGCGCG AGTTGGGCCA TGCCACGGCG GAAGTCGATC GCGTGCTGCG CGGCTACTTC GACCCGTTGG CACAGGCCTA TATCGACGCG CTCCACCTCG CGCTGCCTCA TGCCACGCGC AGCCAGGTGG CGTGGGGCTA TCAGTTCACT CTTGGCGCGC TGCTGCACCA CCTGAGCGAC ACGCGCATCG AACGCCTCTC GCATGGCCAG AACAAGCGCA GCGACCCGGC CGTGGCGCCG ATGCTCGTGA ACTTCATCGT CGGCGGCCTG CGCGCCGCGC TGCCGCGCCC CCAGCCCGGG CGCGCGCAAG AAACCATCCC CGGGAGTGAA CCGACATGA
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Protein sequence | MQARTPIVKR SARRTAAITE AGRPDRRQAI LLAAEKLFAQ HGYHAVTIRQ IAEQAGVPLA LVGYYFGPKH ALFHAIFEHW SHTIDERLAG LAALDNDPDD PRTLVRIIEV FTGPVLALRA GAEGEYYALL VSRELGHATA EVDRVLRGYF DPLAQAYIDA LHLALPHATR SQVAWGYQFT LGALLHHLSD TRIERLSHGQ NKRSDPAVAP MLVNFIVGGL RAALPRPQPG RAQETIPGSE PT
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