Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_0286 |
Symbol | |
ID | 4692895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 320729 |
End bp | 321544 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639848070 |
Product | LysR family transcriptional regulator |
Protein accession | YP_995095 |
Protein GI | 121607288 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.794567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCG GCGCAGCGAG CAAGCGCATC GTCGATCTGG AAAGCGCCGT CGGTGTGCCG CTGCTGGAGC GGCATTCGCG CGGCGTGAAA CTGACGCTCG CCGGCCGGGC GCTGCAGCAG CATGCGCAGC GCATCCTCGG CGACATTGAG CAAATGGGCG CCGACCTTTC AGACTACGCG CGCGGCATCA TCGGCGTGGT GCGCTTGTGG GCCAACACCT CGGCGACCAC GCAGTTCCTG CCCCCCGATC TGGCGCGCTT CGTCCAGGCG AACAACGGCA TCCGCATCGA ACTGGAGGAA CGCAACAGCA GCGAGATCGT GCACGCCGTG CTCGACGGCC GCGCCGACAT CGGCATCTTT GCCGACCGCA CGCCACTGCT GGGCATACAG ACGCTCAACT ACCGCCACGA CCGGCTGGTG CTGGTGCTGC CCAAGCGGCA CCCGCTGGCG GGCCGCAGGG CCATCGATTT CGAGCAGGCG CTGGAGTTCG AGTTCGTCAG CCTGTCGGCC GACACCTCGC TCGCACAGCG GCTGCAAGGC GTGGCCGAGA CGCTGGGGCG GCGGATGCGG CTGCGCATTC GCGTGCGCAG CTTCGACGCG ATGTGCCAGA TGGTCGCGGC CGGACTCGGC GTCGCGGTGC TGCCCGCAAC GGCGGTGCAG CCATACCTGC AATCGATGGG CTTGGAGCAA GTGGCGATCC AGGGCGACTG GGTGCACCGG CAACTGCTCA TCGGCGCCAA GGATTTCAAC GCCGTTGCCC GCCCGGTGCG CGTGCTCGTG GAGCATCTGC TGGCCAGCCC CCCGGCGCCC GGCTGA
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Protein sequence | MSIGAASKRI VDLESAVGVP LLERHSRGVK LTLAGRALQQ HAQRILGDIE QMGADLSDYA RGIIGVVRLW ANTSATTQFL PPDLARFVQA NNGIRIELEE RNSSEIVHAV LDGRADIGIF ADRTPLLGIQ TLNYRHDRLV LVLPKRHPLA GRRAIDFEQA LEFEFVSLSA DTSLAQRLQG VAETLGRRMR LRIRVRSFDA MCQMVAAGLG VAVLPATAVQ PYLQSMGLEQ VAIQGDWVHR QLLIGAKDFN AVARPVRVLV EHLLASPPAP G
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