Gene Veis_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0219 
Symbol 
ID4691706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp239527 
End bp240630 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content73% 
IMG OID639848004 
Productbeta-lactamase 
Protein accessionYP_995029 
Protein GI121607222 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.856689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG GACTCGACAG GAACACCATG GCACGGGCGG CCCTGCTGTG CCTGACCGCA 
GCCATGCTCG GCTGCGCCTC GTCCCCCTGC TTTGCACCGC CGCCCGGCCG CACTGCGGGC
GCTGCGCTGC AACTGCGCGC CGATTGGGAC GCTGCCGCGC TGCAGGAGGT GCTGGCCTAC
GCCCGGTCCC AAAAGACCAC GGGGCTGCTG ATCATCCACG ACCGGCAGGT CGTCGCCGAG
CAGCACTGGC CGCTGCCCGG GGACGCGGCT GCTTTCCGCG CCGCATTCGT GCACGGCCAG
GCTCCCGACG GTGCGCTGCT TGAAGACGTG GCCTCGCAGC AAAAGAGCTT CATCGCCATC
CTGGCCGGCG CAGCGGTCGA CCGCGGGCTG CTGGATGTCG AACGGCCGGT GTCGGCCTAC
CTGGGTGCGG GCTGGTCCAG GGCGGCACCT GCGGCCGAGG CGCGCATCCG CGTGCGCCAC
CTGCTGGAGA TGAACTCCGG CCTGCGGGAA GACCTCCGCC CCGAAGCGGA ACCGGGCGCG
CGGTTCTTCT ACAACACGCC GGCCTACGCA GTGACCCAGC GCGTGCTGGA ACAGGCGGCC
AGGCAGCCCC TGGACGAGCT GACGCGCCGC TGGCTCACCG AGCCGCTGGG CATGGCGCAG
ACGGACTGGC GCGCGCGGCC TGCGGTGCTG GCCGACTCCG GCAACCCCAC CGGGCTGGTG
ACCACGCCGC GCGACATCGC CAGGATGGGC CAGTTGGTGC TCGACCGTGG CCTGGCGCCC
GATGGCCGCC GCGTGATCTC CAGCGCGCAG TTCGATCTGC TGCTGCAACG CAGCGCCACC
AACCCGGCCT ATGGGCGGTT GTGGTGGCTC AATGGCGGCA GCCACGCGCT CCTTGCCGGT
GCCGGCGCGC CCCGGCGCGA GGGCCCGCTG ATCGCAGCGG CGCCCGCCGA CCTCGTGGCG
GCCCTGGGTG CGCACGACCG CAAGCTCTTC GTCGTGCCGA GCCGGCAACT GATCGTCGTG
CGCACCGGCC AGGCAGCGCC GGCGCGCGAC TTCAACCAGC AACTGTGGTT GCGCCTGGCG
CGGGCCTTGC CCGGCGGGGC CTGA
 
Protein sequence
MTAGLDRNTM ARAALLCLTA AMLGCASSPC FAPPPGRTAG AALQLRADWD AAALQEVLAY 
ARSQKTTGLL IIHDRQVVAE QHWPLPGDAA AFRAAFVHGQ APDGALLEDV ASQQKSFIAI
LAGAAVDRGL LDVERPVSAY LGAGWSRAAP AAEARIRVRH LLEMNSGLRE DLRPEAEPGA
RFFYNTPAYA VTQRVLEQAA RQPLDELTRR WLTEPLGMAQ TDWRARPAVL ADSGNPTGLV
TTPRDIARMG QLVLDRGLAP DGRRVISSAQ FDLLLQRSAT NPAYGRLWWL NGGSHALLAG
AGAPRREGPL IAAAPADLVA ALGAHDRKLF VVPSRQLIVV RTGQAAPARD FNQQLWLRLA
RALPGGA