Gene Veis_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0201 
Symbol 
ID4694930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp220269 
End bp221321 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content67% 
IMG OID639847986 
ProductABC transporter related 
Protein accessionYP_995011 
Protein GI121607204 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.490731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCCA TGTCGCACCT CGTCCTCGAT GGTTTGGGCA AATCCTATGG TGACGTGACC 
GTCATCGCGG GGCTCGATCT GGCGGTCGAG CGCGGGGAAT TCGTTTCGCT GCTGGGCCCT
TCCGGCTGCG GCAAGACCAC CACCTTGCAG ATGATCGCCG GCTTCACCCC GGTCGATCGC
GGGCGCATTT TGCTCGACGG CAGTGACCTT GCCACGGTCG CGCCCAGCAA GCGCGGTCTG
GGCATCGTCT TTCAGAGCTA CGCGCTGTTT CCGCATATGA CGGTGGCGCA GAACATCGCT
TTCGGGCTGG AAATGCGCGG CGTTGCCAAG TCCGAGCGCG ACCGGCGCAC CTTGGAGGCG
ATGGCGCTGG TGGACCTCGA TGGCTTTGTC GAACGCTATC CGCGCCGGAT GTCGGGCGGC
CAGCAGCAGC GTGTCGCGCT GGCGCGTGCG CTGGTCATCG AACCGACGCT GCTCCTGCTC
GACGAGCCTT TGTCCAATCT CGATGCCAAG CTGCGCGAGG AGATGCAGGG CGAACTGCGC
CGGATACAGC GCTCGGTCGG CACCACCACG ATCCTCGTGA CCCATGACCA GCATGAGGCG
ATGGCGCTGT CCGACCGCAT CGTGCTGATG AATCAGGGCC GGGTCGAGCA GATCGGTACG
CCGGACGCGA TCTATGCGCG TCCGAGCAGT GCCTTCGTCG CCCATTTCCT CGGCAAAACC
AATATCCTGC AGGGCCGGGG CGACGGTTGC GGCCATGTCG TCATCGGCCC ATTGTCCATT
CCCGTCGCTG GTGCGGGCGC TGGCGCGGTG GCGCTCGCCG TCCGGCCGGA GCGGCTGTCG
ATCGACGCGC CGGGCGCCCG TGGTTTCCCG GCGCGCATCA CCGGCCGGGT GTTCCAGGGC
GCGCATTGGC TGCTGAGCGC CGATAGCGAG GCCGGGGCGC TGTGGCTGCT GCGCAGCAAT
GACGGCAGCA GCATCCCGGC CGATGGCCAA ACCGTGATGC TGTCGTTTGC GCCGGCCGAT
GCCGCCGTGC TCGAGAACGG GGCTGCGCCA TGA
 
Protein sequence
MASMSHLVLD GLGKSYGDVT VIAGLDLAVE RGEFVSLLGP SGCGKTTTLQ MIAGFTPVDR 
GRILLDGSDL ATVAPSKRGL GIVFQSYALF PHMTVAQNIA FGLEMRGVAK SERDRRTLEA
MALVDLDGFV ERYPRRMSGG QQQRVALARA LVIEPTLLLL DEPLSNLDAK LREEMQGELR
RIQRSVGTTT ILVTHDQHEA MALSDRIVLM NQGRVEQIGT PDAIYARPSS AFVAHFLGKT
NILQGRGDGC GHVVIGPLSI PVAGAGAGAV ALAVRPERLS IDAPGARGFP ARITGRVFQG
AHWLLSADSE AGALWLLRSN DGSSIPADGQ TVMLSFAPAD AAVLENGAAP