| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_0173 |
|---|
| Symbol | |
|---|
| ID | 4693113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 195485 |
|---|
| End bp | 196111 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639847958 |
|---|
| Product | regulatory protein GntR, HTH |
|---|
| Protein accession | YP_994983 |
|---|
| Protein GI | 121607176 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.189463 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.704455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCCG TCATCGAAGC CATAGAGATG GATGTCATCC GTGGCCGGAT ACTGCCGCGC
AACAGACTGA TCGAAGATCA CCTGATGGAG GACTACGCTG CCAAGCGCCA TGTGGTCAGG
GCCGCTCTGG CGCAGTTGCA GAGACTGGGG GTGGTCGTCA AACCTCCGCA CCTGGGGGCG
CATATCCGCC GCTTCGATGC GCAAAGTTTG CGCGACCTGT ACCACCTGCG GGCCGTGCTG
CACCGTGCTG CCGTGGCGAG CATGCCATTG CCCGTAGCGC CAGATCGGCT GATGCAGGTC
CGGCATGCGG CCCAGGCCCA CGCGATGGCC GCCGCCACCG GGGATCTGGT GGCGATACAC
CGTAGCAACA TGCTGTTTCA TCGCCTGTTT TACGGCCTGT GCGACAACGC CTACCTTGCC
GAGTCGATTC GGCTGCATGA CTGGCTGAGT TTTCCCGCCC GGGCATACGC CATTGCCGAG
CCCCAGGCCC TGGAGCAGGC TTGTGCGGAA CATGCGGCGA TGGTGGCCGC ATTGGCTGCC
GGCGACCAAG GCCAGTTGGA ACGGCTTGCC GTGGCCCATA TGGGCCGGGC AAGGGCCATC
TATGAGCAGC GGTATCTGCG GGCTTAG
|
|---|
| Protein sequence | MQAVIEAIEM DVIRGRILPR NRLIEDHLME DYAAKRHVVR AALAQLQRLG VVVKPPHLGA
HIRRFDAQSL RDLYHLRAVL HRAAVASMPL PVAPDRLMQV RHAAQAHAMA AATGDLVAIH
RSNMLFHRLF YGLCDNAYLA ESIRLHDWLS FPARAYAIAE PQALEQACAE HAAMVAALAA
GDQGQLERLA VAHMGRARAI YEQRYLRA
|
|---|
| |