Gene Veis_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0161 
Symbol 
ID4692820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp183346 
End bp184308 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID639847946 
Productinner-membrane translocator 
Protein accessionYP_994971 
Protein GI121607164 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCC GCACCCCGCT GTCGCGAGAG CGCCGCTGGC GCTGGTGGGA GCCGGTGTTC 
TGGCTGCTGG CCCTGGCCGC GCCGCTGGTG TTGCCCGGCC AGGCCCTGAT CATCAACACG
ATGGCCATCA CGGCATTGTT TGCGCTGTCG CTGGACCTGA TCCTGGGCTA CGCCGGCATC
GTCTCGCTCG GCCATGCGGC TTTTTTCGGC CTGGGCGGTT ATGCGGCGGC GCTGTTTGCC
AAGCATGTGA TGCCCGACCC GCTGGTCGGG CTGGTGGTGG GCATGGGCGC GGCCACGTTG
CTCGGCGCAG TGGCTTCGCT GACCATCTTG CGCGGCACCG ACCTGACGCG CCTGATGGTC
ACGCTGGGGG TCGGCCTGGT GCTGCTGGAG TTGGCCAACC GGTTCGACGC GCTGACCGGC
GGCGCCGACG GCCTGCAGGG CGTGGTGCTC GGCCCGGTGC TGGGCCGGTT CGAGTTCGAC
CTGTCCGGGC GCACGGCAGC CTGGTATTCG CTCAGCCTGC TGCTGCTGTT CTTTCTGCTC
GCGCGGCGCA TCGTGCAGTC GCCGTTTGGC GCCACGCTCA AGGCGATCCG CGACAACCGG
CTGCGCGCCA TGGCCATAGG CATTCCGGTG ACGCTCCGGC TGGCGCAGGT CTACACGCTG
GCCGCAGCGC TGGCCGGGGC CGCCGGCGCG CTGCACACGC AGACCACGGG CTTTGCCTCG
CTCGACCTGT TCGAGTTTCA CCGCTCGGCC GATGTGTTGC TGATCCTGGT GATCGGCGGC
GTCGGCTGGC TCTATGGCGG CATCCTGGGG GCTGCGGGCC TGATGCTGCT GCAAGACCGG
ATCTCATCGG TCACGCCGCA GTACTGGATG TTCTGGATCG GCCTGTTCCT GGTGCTGCTG
GTGCTGATCG GGCGTGATCG TCTGCTGCGT CCCTGGACCT GGTTCGAGGG GCGCAACGCA
TGA
 
Protein sequence
MEPRTPLSRE RRWRWWEPVF WLLALAAPLV LPGQALIINT MAITALFALS LDLILGYAGI 
VSLGHAAFFG LGGYAAALFA KHVMPDPLVG LVVGMGAATL LGAVASLTIL RGTDLTRLMV
TLGVGLVLLE LANRFDALTG GADGLQGVVL GPVLGRFEFD LSGRTAAWYS LSLLLLFFLL
ARRIVQSPFG ATLKAIRDNR LRAMAIGIPV TLRLAQVYTL AAALAGAAGA LHTQTTGFAS
LDLFEFHRSA DVLLILVIGG VGWLYGGILG AAGLMLLQDR ISSVTPQYWM FWIGLFLVLL
VLIGRDRLLR PWTWFEGRNA