Gene Veis_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_0101 
Symbol 
ID4692162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp123422 
End bp125413 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content56% 
IMG OID639847887 
Productputative transcriptional regulator 
Protein accessionYP_994912 
Protein GI121607105 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0220475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.799174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCCA TACTTCCCAT CAACGTCGAT GATTTGCTGC GTCTGCAAGG CGTTGAGTCA 
GCGCGCGTCG AGTTCAAGGC ATCTTGGGAT GAGAAAACCA CGGGCTCCCA GATCATTCGG
ACAATCTGCG CATTTGCAAA CGACTTCCAG AACTTGAACG GCGGTTACAT CGTCCTTGGT
GTTGCTGAAC AGGACGGTGC CGCCGTCCTT CCTGCCAAAG GACTTTCTGA AAAAGAGATT
GAAGACGCCC AGAAATGGAT ACGGGGACGC TGTAACGTCA TCGATCCGGT ATATCAGCCG
GTACTCTCGC CAGAAATCCA TGAAGGGCAG CGGATTCTGG TGATCTGGGC GCCCGGCAGC
CAAGCACGAC CACATCAGGC ACCAGAGTCT GTCGAAAAAG GTGCGTCCCG GAAGTTCTAC
ATCCGGCTGG GATCGGAAAC GGTGGATGCC GACAGGCAGC CAGAGTTGAA AACCCAGCTC
ATGCAACTGA CGGCGCGCGT GCCTTTTGAT GACCGGCGTG CGTTGCAGGC CAGCGTGCTT
GATATTCGTG AAACCAAGGT GCGTGAGTTT TTGAATGACA TCGGTAGTGG TTTGGTGGAT
GAAGCCGACA CCAAGACGCT TTACCGGGCG CTGCGTATTG CAGACCCCGT GAATGGGCAT
GATGCCCCAC GCAATGTCGG GTTACTGTTT TTCAGCCAGA ACCCTGAACA GTGGTTTCCC
GGTGCGCGGA TAGAGGTCGT GCAGTTCGCG GGAGACTCCA GTGGCAACAC GCTGGAAGAA
AAGGTGTTCA GCAAGCGGCC TGTTCAGGAG CAGCTTCGGG AGTGCCTTGC CTATCTGGAG
GGTTTGTCTG TCCGCATGAT CCAGAAACTG CCTGGGCGAA CCCAGGCGGG CCATTGGGTC
AGCTACCCAT CGTTGGCTTT GCGCGAAGCT TTGGTGAATG CCGTCTATCA CCGTTCGTAT
GAAGGCGTTC AGGAGCCGGT CAAGGTCTAT CTCTATCCAG ACCGGATGGA GATCATCAGC
TATCCGGGGC CTGTACCGGG CGTTGAAATC AAGCATTTGG ATGGCTCTGC GCCTTTGCCA
CCCGTACCCG CACGTAATCG CCGTATCGGG GAACTGCTGA AAGAGTTGCG GCTGGCTGAG
GGGCGCGGCA CAGGCATCCC CAAGGTCAGG CGAACGATGG AACAGAATGG TTCCCCGCCA
CCCCGGTTCG ATTTCGATGA GGCGAGGAGT TACTTCCGCG TCACACTGCC GGTGCATCCA
GAGTATCAAG CGATTCTTGC GCTTCAGGAT GTCGCGCATT TGCGAGCTGT CGGCGATGTC
CAGGGGACGC TACAGCGCCT GCAGGAGGCA TACAAGGCCA ATCCCGCCAC GCTGGGTGTG
GCGGTTGAAT TGGCGAAGGA GTTGGTTTCC AAGGGAGATG TTCATGGCGC AGAAAATATC
CACCAGCAGT TCAAGGCCAG CGCCCCAGCA GCAAACTCTG CGTCGCTGAT AACACTCATT
GCTTCGGCGT GGCTTGATGC AGGTAAGCAG AAGGAGGCAG TTTCTTGGCT TAACAAACTG
CCGCTACTGG ATGCTATTGG CGATGCCTTT GAGGCAGCGA TACAGGAGAA ACGCGCAGGT
AGGTTTGAAA AAGCGCATCG CTATTTCCAG TTAGCCGGAG ATGCTGTTCT TCAGGATGTG
AAGGCGCTTC ACGAGTTCGC TCAAGTCAAA ATGAAACTCG CGGATAAAGC TAGACCACGG
CATCGTTCGG AGAGCCGGGT TGCGTACACC AAGCTGCTGG ATGAGGCCAG GGAAATGTTG
CAGCGTGTAG TGCAGATGAA TGCTCCTCGT GCACGCCATG CATGGGCTTG GTATGACTTG
GGGCGTGTGC TTCGCTGGAG CAAAGCAGCC TTGCCGGAAG TTCGCCGTGC CTTCGAGAAA
GCTGTAGAGA ACGACCCCCA TGAGGACAGA TTCTCGCGGG CGTTGAAGGA GTTGGATGAT
CGCAATGGCT GA
 
Protein sequence
MSSILPINVD DLLRLQGVES ARVEFKASWD EKTTGSQIIR TICAFANDFQ NLNGGYIVLG 
VAEQDGAAVL PAKGLSEKEI EDAQKWIRGR CNVIDPVYQP VLSPEIHEGQ RILVIWAPGS
QARPHQAPES VEKGASRKFY IRLGSETVDA DRQPELKTQL MQLTARVPFD DRRALQASVL
DIRETKVREF LNDIGSGLVD EADTKTLYRA LRIADPVNGH DAPRNVGLLF FSQNPEQWFP
GARIEVVQFA GDSSGNTLEE KVFSKRPVQE QLRECLAYLE GLSVRMIQKL PGRTQAGHWV
SYPSLALREA LVNAVYHRSY EGVQEPVKVY LYPDRMEIIS YPGPVPGVEI KHLDGSAPLP
PVPARNRRIG ELLKELRLAE GRGTGIPKVR RTMEQNGSPP PRFDFDEARS YFRVTLPVHP
EYQAILALQD VAHLRAVGDV QGTLQRLQEA YKANPATLGV AVELAKELVS KGDVHGAENI
HQQFKASAPA ANSASLITLI ASAWLDAGKQ KEAVSWLNKL PLLDAIGDAF EAAIQEKRAG
RFEKAHRYFQ LAGDAVLQDV KALHEFAQVK MKLADKARPR HRSESRVAYT KLLDEAREML
QRVVQMNAPR ARHAWAWYDL GRVLRWSKAA LPEVRRAFEK AVENDPHEDR FSRALKELDD
RNG