| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A1655 |
|---|
| Symbol | |
|---|
| ID | 4681507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008785 |
|---|
| Strand | - |
|---|
| Start bp | 1649694 |
|---|
| End bp | 1650206 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639845923 |
|---|
| Product | FimA |
|---|
| Protein accession | YP_992982 |
|---|
| Protein GI | 121599155 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0316225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CTCTCCTGTC CGCCGTCGCC TGCGCCGCGT TGTCCACGTC CGCATTCGCC
GCCGGCACCG GCACCCTCAA CTTCACGGGC GAGATCGTCG CCGGCGCGTG CGGCATCGAC
GCGGGCTCGG TGGACCAGAC CGTGCGCCTC GGCTTCGTCC CCGCGAACAC GTTCAAGGCG
GCGGGCGACA AGTCGACGCC GCAGAACTTC GACATCAAGC TCGTCGACTG CGACACGAGC
GTCGCGAAGA ACGCGTACTT CACGTTCACG GGCACGTCGA ACGCGACGCA GCCGAAGCTG
ATCGCCACCG TCGGCTCGGC GACGAACGTC GGCATCCGTC TGCAATCGGC GTCGGGCGAA
TACCTCGACA ACGGCGCGGA GCAGAAAGGC CCGGTCGTGC TGAGCAACGG CACGAGCGTC
GCGCGCTTCG CCGCGATGTA CGAATCGACC GCGGCGAGCG TGACGCCAGG CACGGCCGAC
GGCGTCGCGA ACTTCACGGT TCGCTACCAG TAA
|
|---|
| Protein sequence | MKKALLSAVA CAALSTSAFA AGTGTLNFTG EIVAGACGID AGSVDQTVRL GFVPANTFKA
AGDKSTPQNF DIKLVDCDTS VAKNAYFTFT GTSNATQPKL IATVGSATNV GIRLQSASGE
YLDNGAEQKG PVVLSNGTSV ARFAAMYEST AASVTPGTAD GVANFTVRYQ
|
|---|
| |