| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1539 |
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| Symbol | |
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| ID | 4676865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008784 |
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| Strand | + |
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| Start bp | 1510477 |
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| End bp | 1511937 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639844054 |
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| Product | OprD family outer membrane porin |
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| Protein accession | YP_991133 |
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| Protein GI | 121597615 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.993831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAC ATCGATCGAT GAAGAGGGTC GCGCGGGCGG TCGTGCTCGC GTGGGGACTG
CCGATGCTCG CCGGCGTATC GATTGCCGGC GCCGCGCGCG CGGACGATGC GGCGCCCGCC
GCGCCGGCTC AGGCGCCGTT AGCCGCGACG CTCGCGCAGC AGGCGACGAC GCCGAACGCG
CTCGTCAATG CCGACGCCAC GCAGGCGGTG CTGCCGCAGC CGCCGATGTC GAGCCAGGCG
AAATCGAAGG GCTTCATTGC CGACAGCCAT TTCGACGTGC TGTTGCGCAA TTACGCGGAC
GTGCTCGATG CGAAGGGCGG GCCGCATCGT CACGCGTGGG TCCAGGGCGT GATGGCGAAC
TTCGAGTCCG GCTATACGGG CGGGCTGATC GGCTTCGGCG TGGACGCGTC GATCTACGCG
GCGCTGAAGC TCGACGGCGG CGCGGGCGGC GGCAACATGG TGCACGTCGC GAAGGGCGGC
GGCGGCTCGA ACCAGCTCGC TTGGGCGTTC CCCGGCATCT ATGACGTGAA GGCGCGCATC
TCGAACACCG TGATCAAGTA CGGCCTGCAG GCGGTCGACA ATCCGTTCAT GGAGCAGCAC
GACAACCGCG CGCTGCCGCC GACGTTCCTC GGCGCGACGA TCGTGAGCAA CGAATTCAAG
AACGTGATGC TCGAGGCGGG CAGCTTCACG AAGACCAACG CGCGCGGCCA TACGACACTC
ACGAACCTGA CGACGCAATA CGGCGGCACG CGCGTCGACC GCTTCACGTA CGTCGGCGGC
ACGTGGGATT ATTCGCAGAC GGGCTCGGCG TCGTTCTACG CGGGCCAGGC CGACGATGTC
TGGCGCCAGT ACTACGGCTC GGTCAAGCAA AGCTACGGCT CGCCGCAGAC GGTCAAGTGG
ACGGGCTTCG GCAATTTCTA TTCGACGCAC GACACGGGCG ACGCGCGCCA GGGCAAGATC
GACAACAACG CGTACAGCCT GTCGCTCGCC GCGCAGCACG GCCCGCACGA GCTGCTGCTC
GGCTATCAGC AGGTGCTCGG CGACCAGTTC TTCGATTACC TGAACGAAAC GAACGGCATC
TTCCTCGTCG ATTCGATGGA CGTCGACTAC AACGCGCCGC ACGAGAAATC GCTGCAACTG
CGCTACACGT TCTACGGCAA GGAGGCGGGC CTGCCCGGCT TCAAGGCGAT GGTGTGGGGC
GTGACAGGCT GGGGGGCGGA CGGCTCCGCG AGCGCGGCGC TCGATCCGAC GCGCTCGAGC
ATCTACTGGA AGGACGGCGC GCCGGTGCAG GGCCGCCATC ACGAGTTCGG CTTCATCCCG
TCGTATACGA TCCAGAGCGG CAAGCTCAAG GACACGAAGA TCACGTTCAT CGCGATGTGG
CACGTGGGTT CGGCGCACTA CTCGGACAGT ACCAACCAGG AATACCGGCT GGTCGTGAAC
GTGCCGGTGA AGGTGTTCTA A
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| Protein sequence | MTQHRSMKRV ARAVVLAWGL PMLAGVSIAG AARADDAAPA APAQAPLAAT LAQQATTPNA
LVNADATQAV LPQPPMSSQA KSKGFIADSH FDVLLRNYAD VLDAKGGPHR HAWVQGVMAN
FESGYTGGLI GFGVDASIYA ALKLDGGAGG GNMVHVAKGG GGSNQLAWAF PGIYDVKARI
SNTVIKYGLQ AVDNPFMEQH DNRALPPTFL GATIVSNEFK NVMLEAGSFT KTNARGHTTL
TNLTTQYGGT RVDRFTYVGG TWDYSQTGSA SFYAGQADDV WRQYYGSVKQ SYGSPQTVKW
TGFGNFYSTH DTGDARQGKI DNNAYSLSLA AQHGPHELLL GYQQVLGDQF FDYLNETNGI
FLVDSMDVDY NAPHEKSLQL RYTFYGKEAG LPGFKAMVWG VTGWGADGSA SAALDPTRSS
IYWKDGAPVQ GRHHEFGFIP SYTIQSGKLK DTKITFIAMW HVGSAHYSDS TNQEYRLVVN
VPVKVF
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