| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_1105 |
|---|
| Symbol | |
|---|
| ID | 4678426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei SAVP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008784 |
|---|
| Strand | - |
|---|
| Start bp | 1111293 |
|---|
| End bp | 1112003 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639843624 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_990704 |
|---|
| Protein GI | 121598018 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATGGATA TCGGGAGCTA TCCACACTGG CTGCAGGACG TGGTCGGCAC GGTGCGCGCC
GCGCGCGACC GCGTGCGCTT TCACGAAGTG TTCTCGCTGA TGCGCGACAG CCGCCTCGCG
CCGCGGCAGC TCGCCGCGTT CTTCGTGAAC GGCTGGCCTG TCGTCGAGCA GTTCCCGAAG
TACATGTCGA TGAACCTGCT GAAGGCGAAC GGCACGAACT CGTCCGGCGA AGAGAAGGCG
CGCCGCTATC TGATCCGCAA CATCCGCGTC GAGCTGAACC ACGTCGAGCA CTGGGTGAAC
TGGGCGGAGG CGAGCGGCGT GCCGCGCCGG CAACTGACCG ACGGCGACAG CCCGCCCGCC
GCGCTCGCGC TCAGCCACTG GTGCTGGAAG AGCAGCAGCG CGGATACGCT CGCGGCGAGC
ATCGCGGCCA CCAACTATGC GATCGAAGGC GTGACGGGCG AATGGAGCGC GGACCTGTGC
CGCTCGGACG TCTACGAAAT GGGCTTCCCC GAGGCGGTGC GCGGCCGCGC GATGCGCTGG
CTGAGATTGC ATTCGAGCTA CGACGACAAG CATCCGTGGG AAGCGCTCGA CATCGTCGCG
ACGATTCTCG GTCAATCGCC GAGCACCGAA CAGGTGCGAG ACGTCGCGGC CGGCATCGAG
CGCAGCTTCC GCTACTTCGA AATGAGCCTG TCCTGCTGCC TCGACGCGTG A
|
|---|
| Protein sequence | MMDIGSYPHW LQDVVGTVRA ARDRVRFHEV FSLMRDSRLA PRQLAAFFVN GWPVVEQFPK
YMSMNLLKAN GTNSSGEEKA RRYLIRNIRV ELNHVEHWVN WAEASGVPRR QLTDGDSPPA
ALALSHWCWK SSSADTLAAS IAATNYAIEG VTGEWSADLC RSDVYEMGFP EAVRGRAMRW
LRLHSSYDDK HPWEALDIVA TILGQSPSTE QVRDVAAGIE RSFRYFEMSL SCCLDA
|
|---|
| |