Gene BMASAVP1_0552 details

Gene Information

• Locus tag: BMASAVP1_0552
• ID: 4677805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei SAVP1
• Kingdom: Bacteria
• Replicon accession: NC_008784
• Strand: +
• Start bp: 558669
• End bp: 559460
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639843078
• Product: JmjC domain-containing protein
• Protein accession: YP_990161
• Protein GI: 121597134

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGACG CCGCGCAAGC CGATTTTCTG CCGATCGACA GGCGCGACGC GCTGTCGTAC 
GAAGCGTTCG TCGAACAGTA CGCGCTGCCG GGCAAGCCGG TCGTGCTCAC GGGCCTCATG 
CGCGACTGGG AGGCCGCGCG CGTGTGGAAT TTCGAGTACT TCAGGCGCCG TCACGGCCAC 
GTGACGATCG TCGCCCGGCG CTCCGACGAC TACGAACGCA CCATCACGCT GCCGCTCGCC 
GATTACCTCG ACCGCCTCGA CGATCCGGAC GCGCATTTCT ATCTGAAAGA CTGGGTATTC 
GAGAACGACA TCCCGGAGCT GCGCGCGCAG TACCGGGTTC CGCGCCACTT CGCGAACTGG 
GCGACGCGCG TTCCGGGCAA GTGGCAACCG AAATGGCGCT GGCTGTATAT CGGCCCGGCG 
TCGTCGGCGT CGCACCTGCA CGTCGATTTC CTGCTGACGA GCGCCTGGAA CGCGCTGTTC 
GTCGGCGCCA AGCGGTGGCT CGCGTATTCG CCGGATCAGG CGCGGCGCAT GTACCGCGGA 
GCGGTCGACG CGTTTCACCC CGACCTCGAG CGGTTTCCGG AGTTCGCGCA CGCGCGCGCG 
CGCATGCACG TGCAGCGGCC CGGAGAAATC ATGTACATGC CGGCAACGTG GTGGCACGCG 
GTCAGAAACG AGGAGCCGAG CCTCGCGCTA TCGGAGAACT TCATCAATGC CGTCAACGCG 
CGGTATTTTC TGAAGCCTCG CGTGATCGCG CGGTTCCTTC GTTATGCGGA TCATCCGCTT 
TGGGTCAAGT AG 

 

Protein sequence

MNDAAQADFL PIDRRDALSY EAFVEQYALP GKPVVLTGLM RDWEAARVWN FEYFRRRHGH 
VTIVARRSDD YERTITLPLA DYLDRLDDPD AHFYLKDWVF ENDIPELRAQ YRVPRHFANW 
ATRVPGKWQP KWRWLYIGPA SSASHLHVDF LLTSAWNALF VGAKRWLAYS PDQARRMYRG 
AVDAFHPDLE RFPEFAHARA RMHVQRPGEI MYMPATWWHA VRNEEPSLAL SENFINAVNA 
RYFLKPRVIA RFLRYADHPL WVK