Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_1178 |
Symbol | hisS |
ID | 4684829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 1218053 |
End bp | 1219543 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639842345 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_989436 |
Protein GI | 121602225 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 0.534741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAAAAA AAGAAGAAAA AACAAAAGTC CGTTTACCGC GCGGTTTTGT TGATCGCACA AGTGCACAGT TGCATGCTTT GGAAACAATG ATCGCGCAAA TTCACGAAGT TTATGAGTCC TATGGATTTG AAGCACTTGA AACACCTATT TTTGAATATA CGGATGTTTT AGGGAAATTT TTGCCCGATT CAGATCGCCC CAATGCTGGT GTTTTTTCTT TGCAAGATGA AGATGAACAA TGGATGTCTT TACGCTATGA TTTGACAGCA CCTCTTGCGC GCTATTTTGC TGAAAATTTT GAAATTTTAC CAAAGCCTTA TCGCAGTTAT CGTTCTGGTT TTGTTTTTCG TAATGAAAAA CCAGGGCCAG GGCGTTTTAG GCAATTTATG CAATTGGATG CTGATATTGT TGGCTCATCA ACAGTTGCAG CGGATGCTGA GATTTGCATG ATGGCAGCCG ATAGCTTGGA ACGATTAGGT ATTCAACGTC ATGATTATGT TATTCGTTTG AGTAATCGGA AAATTCTTGA CGGTGTTTTA GAGCTGATTG GTTTGCAGGG AGATGAACAA GCTGAGAAAC GCTTAACTAT TCTTAGAGCA ATTGATAAGT TCGATAAATT TGGCATGGAA GGTGTGCGTC TGCTTTTAGG CAAAGGCCGT CTAGATGAAA GTGGGGATTT CACAAAAGGA GCAGGCTTAA GTCAGCAAGA AAGCGAGCCT ATCCTTTCTT TAATTTCTGT TGGTGCTGAA ACGGCTGAAG CGACATTGGA TAATCTTAAA AACATTGTGG GCCACACAAT TCGCGGGTTA GAAGGGATCC ATGAGTTAGA AGAAATGCAG ACTATTTTTA GCAAAAATGG CTATCAAGAT CGCATCAAGA TCGACCCTTC AGTGGTACGT GGGTTGGATT ATTATACAGG GCCTGTGTTT GAAGCCGAAC TGCTTTTTGA TGTTCTCAAT GAAGAAGGCC AAAAAGTTGT CTTTGGCTCT GTGGGTGGCG GGGGACGTTA TGATGGATTA GTTGCACGTT TTCGCGATGA AGCTGTCCCT GCAACTGGTT TTTCTGTGGG CGTATCGCGT TTGATGGCAG CTTTACACAA TCTGGGAAAA TGTCCTGTTA AAAAAACAGT AGGCCCAGTT GTGGTTTTGA TGATGGATAA AGACCCTGAA TATGTGGCGT ATTATCAAAA GATGGTGATG CAGTTGCGCC ATGCCGGCAT TCGTTCTGAA TTATATCTCG GGGCTGCAGG CATAAAGGCG CAAATGAAAT ATGCAGATCG GCGTCATGCC CCCTGTGTGG TGATCCAAGG GGCATCTGAG CGCCAGGAGG GTAAAGTTCA GATTAAAGAT CTGATTGAAG GAGCTCGTTT ATCTGCAGAA ATTAAAGATA ATCAAACATG GCGAGAAAGC CGCCCAGCGC AAATAATGGT TGATGAAAAT CAACTGGTGC AAGCGGTTCA AGAGATTTTG GTTGCTCATC AATTCTTATA A
|
Protein sequence | MSKKEEKTKV RLPRGFVDRT SAQLHALETM IAQIHEVYES YGFEALETPI FEYTDVLGKF LPDSDRPNAG VFSLQDEDEQ WMSLRYDLTA PLARYFAENF EILPKPYRSY RSGFVFRNEK PGPGRFRQFM QLDADIVGSS TVAADAEICM MAADSLERLG IQRHDYVIRL SNRKILDGVL ELIGLQGDEQ AEKRLTILRA IDKFDKFGME GVRLLLGKGR LDESGDFTKG AGLSQQESEP ILSLISVGAE TAEATLDNLK NIVGHTIRGL EGIHELEEMQ TIFSKNGYQD RIKIDPSVVR GLDYYTGPVF EAELLFDVLN EEGQKVVFGS VGGGGRYDGL VARFRDEAVP ATGFSVGVSR LMAALHNLGK CPVKKTVGPV VVLMMDKDPE YVAYYQKMVM QLRHAGIRSE LYLGAAGIKA QMKYADRRHA PCVVIQGASE RQEGKVQIKD LIEGARLSAE IKDNQTWRES RPAQIMVDEN QLVQAVQEIL VAHQFL
|
| |