| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0937 |
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| Symbol | ligA |
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| ID | 4684723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bartonella bacilliformis KC583 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008783 |
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| Strand | - |
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| Start bp | 963536 |
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| End bp | 965689 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639842117 |
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| Product | NAD-dependent DNA ligase LigA |
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| Protein accession | YP_989218 |
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| Protein GI | 121602535 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.0205713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGG ATGCGAAAAA TTTAACTGCT CTCGAAGCAG AGCGTGAGTT AGAGTGGCTA
GCAAAAGAAA TTGCGCGTCA CGATGTGCTT TATAACAATC ATGACCAGCC TGAAATTTCT
GATGCACGAT ATGATGCTCT TCGTCGTCGT AATATAGAAA TTGAGACTCT ATTTCCTGAA
TTGGTTCGAG CAGATTCTCC TTCATATAAA GTTGGTGCTC CAATTTCTGA AAGATTTGAA
AAATCTGTTC ATGCACAGGC GATGTTATCC CTTGATAATG CGTTTAGTTC TGAAGATGTT
CATGAATTTG TTGAGCGTGT TCGTCGTTTT TTACGACTTC CAGTGACAAA AACATTGGAG
ATGACAGCTG AACCGAAAAT TGATGGTCTG TCTTTGTCTT TACGTTATGA AAAAGGAAAG
CTTGTGTGTG CAGCAACCCG TGGTGATGGG TATGTAGGCG AAAATGTTAC TGTGAATGCA
CGAACACTTT CTGATATTCC TCAGGTTTTA CAAGGTGATT TTCCTGATAT TCTTGAGGTT
CGTGGTGAAG TGTATATGAG ACACAGTGAT TTCCAAGACC TTAATGTGGA TCAACAAGAA
AAAGGAAAGT TGGTTTTTGC TAATCCTAGA AACGCTGCTG CAGGTTCTTT GCGTCAGCTC
GATACGCGAA TGACTGCTCG TAGAAAACTT AAATTTTTTG CTTATGGTTG GGGTGAAGTG
AGTGAAATGC CAGCTAAAAG CCAAATGGAG ATGGTAAAGA AGCTAAAAGA ATATGGCTTT
GTTATCAACC CATTAACAAA AGTTTTTAAG GCAGTAGAAG ACCTTATTTC ATATTATCAT
TTTATCGAAG AAGGTCGTCA ACATTTAGAC TATGATATTG ATGGGGTTGT TTACAAGGTT
AATGATTTGC TGTTGCAAAC GCGTTTAGGG AATGTGTCTC GTTCACCACG GTGGGCGATT
GCACATAAAT TTCCAGCAGA AAAAGCAATG GCGCTTCTAG AAAATATTGA CATCCAAATA
GGTCGAACAG GAGCATTAAC GCCCGTTGCG CGTCTCGCAC CTATTACGGT AGGTGGAGTT
GTGGTTACTA ATGCAAGCTT GCATAATGAA GATTATATCA AGGGGCTTGG GAGTAAAAGT
GAATCTATTC GCGAAGGGCG TGATATCCGT ATAGGTGATA CAGTCATTGT ACAGCGTGCG
GGTGATGTAA TTCCCCAGAT TATTGATGTT ATAATTGAAA AGCGTCCAAA AGGTGCGTCT
CCTTTTGTTT TTCCCTCTCT TTGTCCTGCT TGTGGGAGTC ACGCTGTTCG TGAAGTGGGT
GAAGCAGTGC GCCGGTGTAC AGGTGGGTTG ATTTGTCCAG CGCAAGCGAT TGAACGTATT
CGTCATTTTG TTTCGCGCAA TGCTTTTGAT ATTGAGGGGC TTGGTGAAAA ACAGGTAGAA
TTTTTCTTTC ATGCTCAAGA TGAGACACTA CGTATTCACT CACCAGCTGA TATTTTTACT
TTACAAAAAC GCCAAGAAAA ATCTCTAACA CGGTTAGAAA ATATGGAGGG GTTTGGAACT
CTTTCTGTTC GCAAACTTTA TGATGCTATT AATGCTCGCC GAAAAATTCC TTTAAGCCGC
TTTTTATTTG CATTAGGAAT TCGTCATGTT GGAGAGGTCA ATGCACGGCG TCTTGCACGG
GCCTATCAAA ATTATAATGC TTTTGAGACT GTAGCGATGA CAGCACTAAT GCCATGCAAT
AAGGAAGATA AAGGCAATGA GGAGTGGTTA GAACTGACGA GTATCGAAGG GATTGGAGTT
CGTGTTGGTA AAGCGATTAT TGATTTTTAT CAGGAAACTC ATAACCGTGA TGTTTTATCG
AGTTTGCTTC AAGAAGTAAC ACCTCTTCCT GAGGAGGCCG CAGTAGCAGA TTATTCTCCT
GTTGCAGGAA AGACGATCGT TTTTACAGGA ACTTTGGTGC ATATGTCACG TGATGAAGTA
AAAGCGTTGG CAGAACGATT AGGAGCCAAA GCATCTAGTT CCATTTCTAA AAAAACTGAT
CTTCTGGTTG CAGGGATAGG AGCCGGATCG AAATTAACGA AAGCAAAAGA GTTAGGCATT
GAGATTATGG ATGAAGAAAG TTGGCTTCAA TTAATTAATG AGCATCATAT TTAA
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| Protein sequence | MDKDAKNLTA LEAERELEWL AKEIARHDVL YNNHDQPEIS DARYDALRRR NIEIETLFPE
LVRADSPSYK VGAPISERFE KSVHAQAMLS LDNAFSSEDV HEFVERVRRF LRLPVTKTLE
MTAEPKIDGL SLSLRYEKGK LVCAATRGDG YVGENVTVNA RTLSDIPQVL QGDFPDILEV
RGEVYMRHSD FQDLNVDQQE KGKLVFANPR NAAAGSLRQL DTRMTARRKL KFFAYGWGEV
SEMPAKSQME MVKKLKEYGF VINPLTKVFK AVEDLISYYH FIEEGRQHLD YDIDGVVYKV
NDLLLQTRLG NVSRSPRWAI AHKFPAEKAM ALLENIDIQI GRTGALTPVA RLAPITVGGV
VVTNASLHNE DYIKGLGSKS ESIREGRDIR IGDTVIVQRA GDVIPQIIDV IIEKRPKGAS
PFVFPSLCPA CGSHAVREVG EAVRRCTGGL ICPAQAIERI RHFVSRNAFD IEGLGEKQVE
FFFHAQDETL RIHSPADIFT LQKRQEKSLT RLENMEGFGT LSVRKLYDAI NARRKIPLSR
FLFALGIRHV GEVNARRLAR AYQNYNAFET VAMTALMPCN KEDKGNEEWL ELTSIEGIGV
RVGKAIIDFY QETHNRDVLS SLLQEVTPLP EEAAVADYSP VAGKTIVFTG TLVHMSRDEV
KALAERLGAK ASSSISKKTD LLVAGIGAGS KLTKAKELGI EIMDEESWLQ LINEHHI
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