| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BARBAKC583_0473 |
|---|
| Symbol | rnc |
|---|
| ID | 4685102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bartonella bacilliformis KC583 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008783 |
|---|
| Strand | + |
|---|
| Start bp | 477775 |
|---|
| End bp | 478482 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639841665 |
|---|
| Product | ribonuclease III |
|---|
| Protein accession | YP_988789 |
|---|
| Protein GI | 121602768 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0571] dsRNA-specific ribonuclease |
|---|
| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.270178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATC AGACCATTGA TCAACTTAAA AAGCTAACTG GGCATAGCTT TAAAAATGAA
GATCTATTAA AAAAAGCATT GACACATTCC AGTGTTCAAC GTTCAGAACA GGGTAATTAT
GAGCGGTTAG AATTTTTGGG TGACCGTGTT CTTGGACTCT TGGTTGCAGA GATGTTGTAT
CAGTTTTTTC CACAGGCCAG TGAAGGTGAA TTATCAGTGC GTTTGAACGG TTTAGTGAAT
GCACAAACAT GTGCTGATAT AGCAAGAGAA ATAGGTTTGC CTGATATGGT CCATGTTGGT
TGTGAGATGA AAAACTTAGA AGGGCGCCGG TTAGCTAATA TGCATGCGGA TGTTGTTGAA
GCTTTAATTG CGGTGATTTA TCTTGATGGA GGATTGAAAA GTGTTCGCCC CTTCATTCAG
AGATATTGGC AAGATCGAGC AAAGAAAATT GATGCTAGCC GACGTGATGC TAAAACAGAA
TTGCAGGAAT GGGCTCATAC ACAAAATGGT GTACAGCCGC AATATCGGGT TATTAAGCGC
TGTGGGCTGG ATCATGATCC TGTTTTTGTG GTAGAAGTGA GTGTTCCTGG TTTTGTATCT
GAGGTTGGCG AAGGTGGTTC CAAAAGACAT GCTGAGAGAG CTGCAGCTGA AAAAATTTTG
CGACGTGAAG GTATGTGGGG ATCAATAGAG AAAGATGATC ATGGATGA
|
|---|
| Protein sequence | MKHQTIDQLK KLTGHSFKNE DLLKKALTHS SVQRSEQGNY ERLEFLGDRV LGLLVAEMLY
QFFPQASEGE LSVRLNGLVN AQTCADIARE IGLPDMVHVG CEMKNLEGRR LANMHADVVE
ALIAVIYLDG GLKSVRPFIQ RYWQDRAKKI DASRRDAKTE LQEWAHTQNG VQPQYRVIKR
CGLDHDPVFV VEVSVPGFVS EVGEGGSKRH AERAAAEKIL RREGMWGSIE KDDHG
|
|---|
| |