Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BARBAKC583_0382 |
Symbol | |
ID | 4684018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bartonella bacilliformis KC583 |
Kingdom | Bacteria |
Replicon accession | NC_008783 |
Strand | - |
Start bp | 380574 |
End bp | 382304 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639841575 |
Product | TPR repeat-containing protein |
Protein accession | YP_988701 |
Protein GI | 121602403 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTGTA CAACAGCATC CCGCTTTTTT ACTTTCTTTA TGGCAGGAAT TATGCTGATG CCATTACCCG CTTACAGCAA CATTGGTGCA ACTCTTAACA TAAACTCATT TTCAGGTGCC TATTTAGCAG GGCGCGCTGC ACGCTATGAA AACAAAATAG ATCTTGCTAT TAGCTATTTA AAACAAGCAC TCGCCTACAA CCCTGATGAT ATAGGAGTGC AAAAAGAAAT TTTTGAAGCG ATGCTATCCG TAGGTACGTT TCAAGATGCT GTAAAACAAG CAAAAAAACT GAAAGCTCAA GATGTTACCA ATCCCTTTAT TTTTTTAACA TTATCGATAG ATAATTTCAT CAAAAAAAAT TATACGGATG CCAAACTACT CCTGCAAACA AAAACATCTC CTCATATTAA TAATCCAGCT TTTGACATAA TAAGTACGTG GGTTACCTTC GAGTCTGGAA ATCACTCTCA AGCAATCGCT GATCTTGAAA AACTTCTAGG ACCTCCCTGG TACAATCTTT TTATACATTA CCATCTCGCA CTGATGAGTG ATCTCGCAAA GCGTACTAAA GATGCAAAAA AATATTTCAT TCAAGCATTA AACAACCAAC AAGGAGCTAT TGCAGCCCCT GATACCTACG AACGTATAAT CATAGCCTAC GCATCATTCT TATTGCGTCA TAAAATGACT AACAAAGCTA TTGAGACTAT ACAAAATGGT GAAAAAATAT TGTTAGGTCG AGAAGCACTC AAAAACATTA GGAAAAAAAT TGAAAAAGGC GCTAATCTAG AAAATCCAGT TAAAACTCCT CAACAAGGAG CGGGTGAAGT TTTATATGAC TTTGGAACAG CCATCAATCG AAAAGACTCA GAACATATTG CACGTATTTT CATACAATTA TCTTTAGCTT TATACCCTCA AAATGAAGTG GCAGTGTTCC AATTAGCAGA TATCTCTGCC AAGATGAATG ATACCAACCA AGCTATTAAA TTGTATCATG CCTTACCACC TCTCTCCCCT TACTATCGAG ATAGCCAGAT TCAGTTGGCG TTACTTCTCG CCAACAACAA CAACCACAAT GAAGCCATTA AATTACTAAC ATCATTAGAA AAAAAAATCC CCAATGATCG TTATATTTTT ATGGCGCTAT CTGCTATTCA TATGCAAGCA AACAACTTTG CTGAAACTAT CAAAGTTATC AATCGTGCTA TGACAGGCAT AACAGATTTT CAAAAAGATG ATTGGCAACT CTTTTATCAG CGTGCTATTG CTTTTGAACA TTTAAAACAA TGGCCAAAAG CAGAAAATGA CTTGCGAAAA GCCCTTGAAT TATTCCCTGA TCAACCACAA GTTCTTAATT ATCTAGGATA TATGCTTATT GAGCGTGATC AGGAACTCGA AGAATCTCTT CGTATGCTGC AAAAAGCCTC TAAATTACAA TCACAAAATA GTTATATCCT CGATTCTTTA GGATGGGCCT ACTATAAACT TAAACAATAT GATCAAGCTG TTGAAATATT AGAAACCGCC GTTAAATTGC AACCTCAAGA CCCAGTATTA AATGACCATT TAGGCAATGC CTATTGGCAA ATTGGACGCA AACGTGAAGC AATATTTCAA TGGAATCACG CAATTGATGG ACAGCCAGAG AATTTAGAGA AAATCAAAGA AAAATTGAAA TTTGGTTTGC AAAAAACAAC AACGCTTGAC CATAACCATA CGAAATTATA G
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Protein sequence | MRCTTASRFF TFFMAGIMLM PLPAYSNIGA TLNINSFSGA YLAGRAARYE NKIDLAISYL KQALAYNPDD IGVQKEIFEA MLSVGTFQDA VKQAKKLKAQ DVTNPFIFLT LSIDNFIKKN YTDAKLLLQT KTSPHINNPA FDIISTWVTF ESGNHSQAIA DLEKLLGPPW YNLFIHYHLA LMSDLAKRTK DAKKYFIQAL NNQQGAIAAP DTYERIIIAY ASFLLRHKMT NKAIETIQNG EKILLGREAL KNIRKKIEKG ANLENPVKTP QQGAGEVLYD FGTAINRKDS EHIARIFIQL SLALYPQNEV AVFQLADISA KMNDTNQAIK LYHALPPLSP YYRDSQIQLA LLLANNNNHN EAIKLLTSLE KKIPNDRYIF MALSAIHMQA NNFAETIKVI NRAMTGITDF QKDDWQLFYQ RAIAFEHLKQ WPKAENDLRK ALELFPDQPQ VLNYLGYMLI ERDQELEESL RMLQKASKLQ SQNSYILDSL GWAYYKLKQY DQAVEILETA VKLQPQDPVL NDHLGNAYWQ IGRKREAIFQ WNHAIDGQPE NLEKIKEKLK FGLQKTTTLD HNHTKL
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