Gene Ajs_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_4100 
Symbol 
ID4673675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4379691 
End bp4379957 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content68% 
IMG OID639841140 
Producthypothetical protein 
Protein accessionYP_988279 
Protein GI121596383 
COG category[S] Function unknown 
COG ID[COG3205] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.66536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA TCCGCATCGC CGCCCGCCAC AACCTGCCCA CGCTGGCCAA GACCGGCAGC 
TATTACGTGA TCCACATCTG CGTGGCCGCC CTGGTGGCGT ATGCCGTCAC GGGCAATCTG
ATTGCGTCGC TCACCCTCAG CCTGCTGGAG CCCACGGTGC AGGCCGTGGC GTTCTTCTTC
CATGAAAAAG CCTGGGAGCG CGCCCGCCAG CGCCGCGAGG CACAGGCACA CGCCCCTGCG
GAGGCCGCCC ATGCGCATGC CGCCTGA
 
Protein sequence
MSRIRIAARH NLPTLAKTGS YYVIHICVAA LVAYAVTGNL IASLTLSLLE PTVQAVAFFF 
HEKAWERARQ RREAQAHAPA EAAHAHAA