| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4024 |
|---|
| Symbol | |
|---|
| ID | 4672179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 4292764 |
|---|
| End bp | 4293405 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639841064 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_988204 |
|---|
| Protein GI | 121596308 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAAT GGCGGCGTGT ACGGGCTTTT TGCCCTCCCC GCCATCCCTG CACCATGCCA
CGCCTGACCT TGCCGCTGCT CCTATGCGCC ACGCTGCTGG GCCCCGCCGC CCAGGCGGCG
GATGTTGCGG CGACTCCCGC AGTAGACGCC CAGGCCTGCC CCGCTCTGCT GCAGCACACC
GTGCCGCGCC TGCAGGACGA GGCGCCGCAG GCCTTGTGCC AATACGCCGG CAAGGTGCTG
CTGGTGGTCA ACACGGCCAG CTACTGCGGC TTCACCGGCC AATACCAGGG CCTGGAAGAG
CTGTACGCGC GCTACCGCGA CCAAGGGCTG GTGGTGCTGG GCTTTCCGTC GAACGACTTT
GCACAAGAAA CCGGCAGTAA CACCGAGATC GCCCAGTTCT GCGAAAACAC GTTTGGCGTG
CGCTTCCCGA TGTTTGCCAA GAGCCACGTG AAGGGCGGCG AAGCTCTGCC GCTGTACCGC
CAGCTCGCCG CAGCGTCCGC GGGGCAGACG CCACGCTGGA ACTTCCACAA GTACCTGGTC
AGCCGTTCGG GCAAGGTGGT GGGAAGCTAC GGAAGTTCGG TGGAACCCCA CAGCAAAGCG
CTGATCCAGG CCATCGAGCA GCAACTGGCG GCGCCGCGTT GA
|
|---|
| Protein sequence | MVQWRRVRAF CPPRHPCTMP RLTLPLLLCA TLLGPAAQAA DVAATPAVDA QACPALLQHT
VPRLQDEAPQ ALCQYAGKVL LVVNTASYCG FTGQYQGLEE LYARYRDQGL VVLGFPSNDF
AQETGSNTEI AQFCENTFGV RFPMFAKSHV KGGEALPLYR QLAAASAGQT PRWNFHKYLV
SRSGKVVGSY GSSVEPHSKA LIQAIEQQLA APR
|
|---|
| |