Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_4012 |
Symbol | |
ID | 4671795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4271170 |
End bp | 4272879 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639841052 |
Product | protein of unknown function DUF894, DitE |
Protein accession | YP_988192 |
Protein GI | 121596296 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCC AGCCCCTCCA TGACAGCGGA CCGCTGAGTT CACAGCCCAC GCCGCCAGGC CCCGACGCGG CCTCCGCCGC CGCCCACACC GCCGAGGCCG CAGCCACAGC CGAGTTGCAG CACAGCGCGG CGCAGCGTGC GCCGCAGTCG CCCTTCGCGC CGCTGTCGGT GCCGGTGTTC CGCATGCTGT GGCTCACCTG GCTGGCGGCC AACACCTGCA TGTGGATGAA CGACGTGGCC ACGGCCTGGC TGATGACCAC GCTGACCGAT TCGCCTGCCC TGGTGGCGCT GGTGCAGACG GCCTCGACGC TGCCCGTGTT CCTGCTGGGC TTGCCCAGCG GCGCGCTGGC CGACATCCTG GACCGGCGGC GCTATTTCAT GGTCACGCAG TTTTGGGTGG CGGCCGTGGC GGTGGTGCTG TGCGTGGCCA TCCTCTGGGG TGGGCTCAAC CCCTACCTGC TGCTGGCGCT GACGTTCGCC AACGGCATCG GGCTGGCGAT GCGCTGGCCG GTGTTTGCGG CCATCGTGCC GGAGCTGGTG AACCGCCAAC AGTTGCCCGC GGCGCTGGCG CTCAATGGCG TGGCCATGAA CGCCTCGCGC ATCATTGGCC CGCTGGTGGC CGGCGCCATC ATCGCCAGCG CGGGCAGCGC CTGGGTGTTC GTGCTGAATG CCGTGCTGTC GCTGGTGGCG GGGTTCACCA TCATGCGCTG GCGGCGCCAG CCCATGCCCA ACCCGCTGGG GCGCGAGCGC CTGACCAGTG CCATGCGCGT GGGTCTGCAG TTCGTGCGCG AGTCGCCCCC GATGCGCGCC GTGCTGTGGC GCATCTCGAT CTTCTTCCTG CATGCCACGG CGCTGCTGGC GCTGCTGCCG TTGGTGGCGC GCGACCTGCA GGGCGGCGGC GCGGGCACCT TCACGCTGCT GCTGGCCTCC ATGGGCGCGG GCGCCGTGAG CGCTGCCATG TTCCTGCCGC GCCTGCGCCA GATGATGTCG CTGGACCAGC TGGTGGCGCG CGGCACGCTG CTGCAGGCGC TGGCCACGGC CGTGGTCGCC ATTGCGCCCA ACGTGTACGT GGCGGTGCCG GCCATGCTGG TCGGCGGGGC GGCGTGGATC ACCACCGCCA ATTCGCTCAC GGTGGCCGCA CAGCTGGCGC TGCCCAACTG GGTGCGCGCG CGCGGCATGT CCATCTACCA GATGTCCATC ATGGGCGCCA CGGCCGTGGG CGCGGCGCTG TGGGGGCAGG TCGCCGCACT CTCCAGCGTG CACATGAGCC TGGCATTGGC GGCACTCACC GGGGTGCTGG TGATGGCGCT GGTACAGCGC CTGGTGAGCA ACCGCCATGG CGAGGAGGAC CTGAGCGCCT CGCGCGCCTT CCAGGCACCG CGGGCCGACA GCCCGCCCGC CGCCGGCCTG CGGCTGGTGG TCAGCATCGA ATACTTCATC AACCCCGCAC GGGCGGCGGA ATTTCGCGCC GTGATGCAGG AAAGCCGCCG CGCGCGCCTG CGCCAGGGCG CCTTGAGCTG GGAGCTGCAG CACGACATCG CCGACCCGCG CCGCTACGTG GAGCGCGTGG TGGACGAATC CTGGACGGAG CACCTGCGGC GCTTTGACCG CGTCACCGCC TCCGACGTGG CGCTGCGCGA CAGGCGCTTT GCCTTCCACG TGGGCGACGC GCCGCCCGTG GTGTCGCGCT ACGTGGTCGA GGGCGAATGA
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Protein sequence | MPPQPLHDSG PLSSQPTPPG PDAASAAAHT AEAAATAELQ HSAAQRAPQS PFAPLSVPVF RMLWLTWLAA NTCMWMNDVA TAWLMTTLTD SPALVALVQT ASTLPVFLLG LPSGALADIL DRRRYFMVTQ FWVAAVAVVL CVAILWGGLN PYLLLALTFA NGIGLAMRWP VFAAIVPELV NRQQLPAALA LNGVAMNASR IIGPLVAGAI IASAGSAWVF VLNAVLSLVA GFTIMRWRRQ PMPNPLGRER LTSAMRVGLQ FVRESPPMRA VLWRISIFFL HATALLALLP LVARDLQGGG AGTFTLLLAS MGAGAVSAAM FLPRLRQMMS LDQLVARGTL LQALATAVVA IAPNVYVAVP AMLVGGAAWI TTANSLTVAA QLALPNWVRA RGMSIYQMSI MGATAVGAAL WGQVAALSSV HMSLALAALT GVLVMALVQR LVSNRHGEED LSASRAFQAP RADSPPAAGL RLVVSIEYFI NPARAAEFRA VMQESRRARL RQGALSWELQ HDIADPRRYV ERVVDESWTE HLRRFDRVTA SDVALRDRRF AFHVGDAPPV VSRYVVEGE
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