Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3997 |
Symbol | |
ID | 4671135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 4251318 |
End bp | 4252244 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639841037 |
Product | LysR family transcriptional regulator |
Protein accession | YP_988177 |
Protein GI | 121596281 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.494365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTGC GCCGCCTTCA CCCGCCGCTG CACCTGCTGC GGGCGTTCTG TACCGTGGCC CGCTTCGGGG GCATCTCGCG CGCGGCCGAG GCGCTGCACC TCACCCAGAG CGCGGTGAGC AAGCAGGTGC AGGAGCTGGA GCGCTGGGTG GGCGTTCCGC TGTTCGAGCG CAGCCGCAAG CGCCTGTCGC TCACGCCCGC CGGGGAGCGC TACGAAAAGG CCGTGAGCGC CCTGCTCGCC CGCCTGGAGG CGGCCACGCT GGAGCTGATC ACCAGCGGTG ACGAGGGCGG CGCGCTGCAC CTGTCGGTGC TGCCCACGCT GGCCGCCAAG TGGCTGATTC CGCGCCTGCC GCAGCTGCGT GCGCAGCACC CGCAGATCAC GCTGCACTTC GTGCCCTACG TGCACGGCTA CGACTTTGCC GACCCCGAGC TGGACTGCTC CATCCTGTTC GGCGATGGGC ACTGGCCGGG CGCACGCGCG CACTACCTGA CGGGCAACGA CGTGGCCCTG ATCGGCCCGC GCGCCGGGCT GGCCGGCGCG CCGCCCCTGC ACAGCCCGCA GGACGTGGCA CGCCACACGC TGCTGCGCCA CGTGAGCGTG CCCGGCGCCT GGCAGCACTG GGCCGAGGCG CATGGCGTGA ACGGCCTGGA CCCGCTGGCC GGCCCGCAGT TCGACCAGTT CCAGACCATC ATCCGCGCGG TGTCGGTGGG CATGGGCCTG GCCCTGGTGC CGCGCTGCCT GGTGCAGGAC GAGATTGCCG CCGGCACCGT CACCGAGCCG CTGCCCGGCG GCGGCTACAC GAGCGACCTG GGCTACTGGC TGTGCTACCC CGAGTCGCGT GCGCAGCTGG TCACACTGGT GCGCTTTCGC GACTGGCTGC TGGCGCTGGC GGACCCCGCA GCGGGCACGG CCGCACCGGC TGCTTGA
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Protein sequence | MILRRLHPPL HLLRAFCTVA RFGGISRAAE ALHLTQSAVS KQVQELERWV GVPLFERSRK RLSLTPAGER YEKAVSALLA RLEAATLELI TSGDEGGALH LSVLPTLAAK WLIPRLPQLR AQHPQITLHF VPYVHGYDFA DPELDCSILF GDGHWPGARA HYLTGNDVAL IGPRAGLAGA PPLHSPQDVA RHTLLRHVSV PGAWQHWAEA HGVNGLDPLA GPQFDQFQTI IRAVSVGMGL ALVPRCLVQD EIAAGTVTEP LPGGGYTSDL GYWLCYPESR AQLVTLVRFR DWLLALADPA AGTAAPAA
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