| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3963 |
|---|
| Symbol | |
|---|
| ID | 4671793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 4220005 |
|---|
| End bp | 4220922 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639841005 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_988145 |
|---|
| Protein GI | 121596249 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0830128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.322468 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC TGCCGCCCTG GCTACAGCCC GACCGCATGC CGTCGGTGAC GCCCTCCCAG
CCGCGCCTGA AGATCGGCCT GTCCGCGTGC TTTTCGCATG CGGACCCGGG CCGGCCGCTG
TTCACCAACA AGACCCTGCA GTACGTGGAG CAGTCCATCG CGCACTGGAT CATGTCGGCC
GGGGCGCTAG TAGTGATGGT GCCCTGCCCC ACGGGCGAGA CCGCGCGCGG CGACGTCACG
CTCAAGCACT ACGCCGAGTG GCTCGACGGC GTGGTGATGC ACGGCGGGGC GGACGTCTGG
CCCGGCAGCT ACGGCGAGGT GCCGCTCAAG GACGCATGGC TGGGCGACCG CGTGCGCGAC
CTGTACGACC TGGCGGTCGT GGAGGCCTTC GAGCAGGCCG GCAAGCCCAT CTTCGGCGTG
TGCCGCGGGC TGCAACTCAT CAACGTGGCT TTTGGCGGCA CGCTGTACCA GGACATCGAG
ACCCAGCACC CCGGCGCGCT GCAGCACCGC AACCCGAGCA CCTACGACCA GCACTTCCAC
GAGGTGGACA TCGTGCCCGG CACGCGGCTG GCGCGGCTGT ATCCGGAGCA GCCGCGCGTC
ACCGTGAACA GCATCCACCA CCAGGGCATC AAGAACCTGG CGCCCGGCTT CGACATCGAG
GCCTGGAGCT ACCCCGACGG CGTGCCCGAG GCGATACGCC GCAACCCGAG CCACGGGCGC
GGCTACATCG CGGCGACGCA GTGGCACCCG GAATTCCGCG CCAGCGCGGC CGTCACGCTG
GACGACTCGC CGCTGCTGCA CGACTTCCTG GCCGCCTGCA GCCGGGCGCG CGTGCTGCCC
CGACCCGGCC ACAGCCCGCT GCAGATCCGC GACCGCGCGG AGCGCCTGCT GCGCCGCGCA
TTGCTGCGCA GGCGTTAA
|
|---|
| Protein sequence | MTVLPPWLQP DRMPSVTPSQ PRLKIGLSAC FSHADPGRPL FTNKTLQYVE QSIAHWIMSA
GALVVMVPCP TGETARGDVT LKHYAEWLDG VVMHGGADVW PGSYGEVPLK DAWLGDRVRD
LYDLAVVEAF EQAGKPIFGV CRGLQLINVA FGGTLYQDIE TQHPGALQHR NPSTYDQHFH
EVDIVPGTRL ARLYPEQPRV TVNSIHHQGI KNLAPGFDIE AWSYPDGVPE AIRRNPSHGR
GYIAATQWHP EFRASAAVTL DDSPLLHDFL AACSRARVLP RPGHSPLQIR DRAERLLRRA
LLRRR
|
|---|
| |