Gene Ajs_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3890 
Symbol 
ID4673952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4130951 
End bp4131703 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID639840923 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_988073 
Protein GI121596177 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.990954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACT TTTCACGCAC GCTTTCGCTG ACGGGGGCGT CCAACTTCCG TGATCTGGGA 
GGCTATCCGG GGCTGGATGG ACGCACGGTA CGCTGGCGCC GGTTGTTCCG CTCCGATCAT
CTGGCGGCCC TGACACCGCA GGACGCGCAG GTGCTGGCCG GTGTGGGGCT GACCCGCTCG
GTGGACTTCC GCGGGCTGGT GGAGAGCGCG GCCCAGTCGT ATGCGCTGCC GCAGGTGCGC
TATCACGCGC TGCCGATCGA GCCGACCGTC GTGCAGCGCG CCAAGGAACT GGCGGTAGCG
GGCCAACAGA TCACGGCACC CGTTGCGGTA GGGCTGATGC AGGACACCTA CCGCGCCTTT
GTTTCCGACA ACGCGCAGCA GTTTGCGGGC TTGTTCGAGC AGTTGCTGGC AGAGGATTCC
CCCCTGGTCT TTCACTGCAC TGCGGGCAAG GACCGCACCG GTTTCGCCGC GGCCCTGATT
CTGCTGGCGC TCGGCGTGTC GCGCGAGGTG GTGATGCAGG ACTACCTGTT GACTAACGCG
CTGTACCGTC GGCCCGCGGG GATGGTCAGC TCTGCGCCGC AGGAGGTGCT GAACGTGATC
TGGCGCGTGC AGGAGGACTT CCTGGAGGCC GCATTGCAAG CCGTTGACCA GGACCACGGC
GGCGTGCAGC GTTACCTGGA GCGTCGCCTG GGCGTGGACG ATGCCGCGCG CAACCGCCTG
GCGCAGCTGT ACCTGCAGCC GCTGCCGGAG TGA
 
Protein sequence
MQDFSRTLSL TGASNFRDLG GYPGLDGRTV RWRRLFRSDH LAALTPQDAQ VLAGVGLTRS 
VDFRGLVESA AQSYALPQVR YHALPIEPTV VQRAKELAVA GQQITAPVAV GLMQDTYRAF
VSDNAQQFAG LFEQLLAEDS PLVFHCTAGK DRTGFAAALI LLALGVSREV VMQDYLLTNA
LYRRPAGMVS SAPQEVLNVI WRVQEDFLEA ALQAVDQDHG GVQRYLERRL GVDDAARNRL
AQLYLQPLPE