Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3890 |
Symbol | |
ID | 4673952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4130951 |
End bp | 4131703 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639840923 |
Product | protein tyrosine/serine phosphatase |
Protein accession | YP_988073 |
Protein GI | 121596177 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2365] Protein tyrosine/serine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.990954 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACT TTTCACGCAC GCTTTCGCTG ACGGGGGCGT CCAACTTCCG TGATCTGGGA GGCTATCCGG GGCTGGATGG ACGCACGGTA CGCTGGCGCC GGTTGTTCCG CTCCGATCAT CTGGCGGCCC TGACACCGCA GGACGCGCAG GTGCTGGCCG GTGTGGGGCT GACCCGCTCG GTGGACTTCC GCGGGCTGGT GGAGAGCGCG GCCCAGTCGT ATGCGCTGCC GCAGGTGCGC TATCACGCGC TGCCGATCGA GCCGACCGTC GTGCAGCGCG CCAAGGAACT GGCGGTAGCG GGCCAACAGA TCACGGCACC CGTTGCGGTA GGGCTGATGC AGGACACCTA CCGCGCCTTT GTTTCCGACA ACGCGCAGCA GTTTGCGGGC TTGTTCGAGC AGTTGCTGGC AGAGGATTCC CCCCTGGTCT TTCACTGCAC TGCGGGCAAG GACCGCACCG GTTTCGCCGC GGCCCTGATT CTGCTGGCGC TCGGCGTGTC GCGCGAGGTG GTGATGCAGG ACTACCTGTT GACTAACGCG CTGTACCGTC GGCCCGCGGG GATGGTCAGC TCTGCGCCGC AGGAGGTGCT GAACGTGATC TGGCGCGTGC AGGAGGACTT CCTGGAGGCC GCATTGCAAG CCGTTGACCA GGACCACGGC GGCGTGCAGC GTTACCTGGA GCGTCGCCTG GGCGTGGACG ATGCCGCGCG CAACCGCCTG GCGCAGCTGT ACCTGCAGCC GCTGCCGGAG TGA
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Protein sequence | MQDFSRTLSL TGASNFRDLG GYPGLDGRTV RWRRLFRSDH LAALTPQDAQ VLAGVGLTRS VDFRGLVESA AQSYALPQVR YHALPIEPTV VQRAKELAVA GQQITAPVAV GLMQDTYRAF VSDNAQQFAG LFEQLLAEDS PLVFHCTAGK DRTGFAAALI LLALGVSREV VMQDYLLTNA LYRRPAGMVS SAPQEVLNVI WRVQEDFLEA ALQAVDQDHG GVQRYLERRL GVDDAARNRL AQLYLQPLPE
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