Gene Ajs_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3853 
Symbol 
ID4671126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4089895 
End bp4090647 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID639840886 
Productmetal-dependent hydrolases related to alanyl-tRNA synthetase 
Protein accessionYP_988036 
Protein GI121596140 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG ACCTTTTCCG CGCCGACAGC TACCTGCGCG AATGCAGCGC CACCGTCACC 
GCCCTCACGC CCGAAGGTGG CGTGGTGCTG GACCGCACCG TGTTCTACCC GCTGGGCGGC
GGCCAGGCCG GCGATGCCGG CGTGCTGCTG CGCCCCGATG GCACGGCACT GGCCATCGCC
GACACGCGCA AGGGCAAGGA CGCCGAGGGG CGGCCCACCG CGGACATCGT GCATGTGCCC
GCGCCGGGCC AGGCGCTGGG ACTGGCGGTG GGCGACGCGG TCACAGCGCG CATCGACTGG
GAGCGCCGCC ACCGGCTGAT GCGCTTTCAC ACCACCACGC ACCTGCTGTG CCACATCGTC
GCGCAGCCGG TGAACGGCTG CTCGATCACG CCCGACTACG CGCGCCTGGA CTTCCACATG
GACGGTGCGC TGGACAAGGA CGCGCTCACC GCCGCCATCG CGCGCCTGGT GGCGCAAGAC
CATGCGGTGA CCATCGGCGC GATCAGCGAC GCGGCACTGG ACGCCAACCC GCAGCTCGTC
AAGAGCATGA GCGTGCAGCC CCCGCGCGGC ACCGGCACGG TGCGCACGGT GCGCGTGGGC
GGCGCCTGCG ACGGCGACGC CGCGCAGATC GACCTGCAGC CCTGCGGCGG CACGCATGTG
GCGCGCACCG GCGAGATCGG CGCCGTGGTG GTCACCAAGA TCGAGAAAAA GGGCGCCATG
TCGCGCCGCG TGGTGCTGGG CTTGGGCGCC TGA
 
Protein sequence
MTHDLFRADS YLRECSATVT ALTPEGGVVL DRTVFYPLGG GQAGDAGVLL RPDGTALAIA 
DTRKGKDAEG RPTADIVHVP APGQALGLAV GDAVTARIDW ERRHRLMRFH TTTHLLCHIV
AQPVNGCSIT PDYARLDFHM DGALDKDALT AAIARLVAQD HAVTIGAISD AALDANPQLV
KSMSVQPPRG TGTVRTVRVG GACDGDAAQI DLQPCGGTHV ARTGEIGAVV VTKIEKKGAM
SRRVVLGLGA