Gene Ajs_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3844 
Symbol 
ID4670639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4080026 
End bp4080970 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content74% 
IMG OID639840877 
Producthypothetical protein 
Protein accessionYP_988027 
Protein GI121596131 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAGGC CACCGGCGGC GTCCCCCTGG AGGGGGAAGG CGCGAAGCGA CTCAGGGGGT 
GATTCGGAAT CACGCGGCCT GCTGCTGGGC TTGCTGGGCG TGGCGATCTT CGCGCTCACC
CTGCCCATGA CGCGCCTGGC CGTCGGCACG CCCGAGGCAC CGCTGATGTC CGGCCTGTTC
CTGGCCATGG GCCGCGCGGC GGTGGCCGGG CTGCTGTCGG CCGCGCTGCT GCTGTGGCAG
CGCGCGCCAT TGCCGCGGCG CGGCGACTGG TGGCCGCTGG CCGTGACGGC GCTGGGCGTG
GTGTTCGGCT TTCCGCTGCT CACCTCCATC GCCATGCGCT ACGTGGGCGC CGTGCACGCG
GCCGTGATCA TCGGCCTGCT GCCGCTGGCG ACCGCCACCG CGGGCGCGCT GCTGCACCGC
CAGCGGCCGT CTGCCGCGTT CTGGGCCTGC GCGCTGCTGG GCTCGGCGCT GGTGGTGGTG
TTCGCGGTGC TGCGCTCGGG CCGGCAGGGC CTGTCGCTGC ATCCGGCCGA TCTGCTGCTG
ATGGCCGCCG TGGCCTGCGC CGCCGTGGGC TACGCCTGGG GCGGGCGGCT GGCGCAGCAC
ATGCGCGCCG ATGCGGTGAT CTGCTGGGCC CTGGTGCTGT CGCTGCCCGT ATCGCTGCCG
CTGGCCTGGC TGGCATGGCC GCAGGCGGCG GTGCCTGCCG CGGCCTGGGC TGGCTTTGCC
TACGTGGCGG TGTTTTCGAT GTGGCTGGGC TTCTTCGCCT GGTACCGCGG CCTGGCCCTG
GGCGGCACGG TGCGGGTGAG CCAGGTGCAA CTGGCCCAGC CGTTCATGAG CATGCTGTTT
GCCGTGCCGC TGCTGGGCGA GTCGCTGGAC GCGGTGAGCG TGGCGTTTGG CCTGGCGGTG
CTGGCCACCG TGGCCCTGGG GCGGCGCATG CCGGTGCGCC GGTGA
 
Protein sequence
MARPPAASPW RGKARSDSGG DSESRGLLLG LLGVAIFALT LPMTRLAVGT PEAPLMSGLF 
LAMGRAAVAG LLSAALLLWQ RAPLPRRGDW WPLAVTALGV VFGFPLLTSI AMRYVGAVHA
AVIIGLLPLA TATAGALLHR QRPSAAFWAC ALLGSALVVV FAVLRSGRQG LSLHPADLLL
MAAVACAAVG YAWGGRLAQH MRADAVICWA LVLSLPVSLP LAWLAWPQAA VPAAAWAGFA
YVAVFSMWLG FFAWYRGLAL GGTVRVSQVQ LAQPFMSMLF AVPLLGESLD AVSVAFGLAV
LATVALGRRM PVRR