Gene Ajs_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3833 
Symbol 
ID4670726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4065868 
End bp4066584 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID639840866 
Productflagellar L-ring protein 
Protein accessionYP_988016 
Protein GI121596120 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT CCCTTCTGCG CCTTCTGGCA GCGGCCACCG CTGCCGCGCT GGCCGCCGGC 
TGCGCCAGCA TCAACCCGCC CCCGCCGGTG GACGTGCTGC CCACCACACC GCCCCCGATC
GCCGCCCTGC CGCGCCCCGT CGGCCCGGCC TCGGGAAGCC TGTTCCATGC CGCCAGCTAC
CGGCCTGCTT TCGAGGATCA ACGCGCGCGC CTGGTGGGCG ACATGGTCAC CATCGAGATC
CTGGAGAGCA TCGACGCCAA GCAGGACACC AAGTCCAACG TCAACCGCAA CGGCGATACC
AAGGGCAGCA TCACGGCGCT GCCGCTGCTG GCCCCCTCCA CGGTGGGCAA GCTGGCCGCG
CGATCGGGCC TGGGCGCGGG CTACGAGAAC ACCTTCAACG GCAGCGGCAA CACCGCCAGC
AAGAACGAGT TCAAGAGCAA CATCACCACC CTCGTCACCG AAGTGCTGCC CAACGGCCAC
CTGGTCATCA CCGGCGAGAA GCAGGTGGGC GTGAACCGCA GCGTGGATGT GCTGCGCTTC
TCGGGCATCG TCGATCCCCG CCACCTGCGC CGCGGCCAGC CGGGCCATCC GGGCAGCGTG
ATCGACTCGC GCTACGTGGC CAATGTGCGC GTGATCTCCC GCGGCCTGGG CGAGCAGGCC
GAGGCCCAGG CCATGGGCTG GCTGGCGCGC GCGTTCAACA CCATCAGCCC GTTCTAA
 
Protein sequence
MTTSLLRLLA AATAAALAAG CASINPPPPV DVLPTTPPPI AALPRPVGPA SGSLFHAASY 
RPAFEDQRAR LVGDMVTIEI LESIDAKQDT KSNVNRNGDT KGSITALPLL APSTVGKLAA
RSGLGAGYEN TFNGSGNTAS KNEFKSNITT LVTEVLPNGH LVITGEKQVG VNRSVDVLRF
SGIVDPRHLR RGQPGHPGSV IDSRYVANVR VISRGLGEQA EAQAMGWLAR AFNTISPF