Gene Ajs_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3793 
Symbol 
ID4671021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4030040 
End bp4031161 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content71% 
IMG OID639840826 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_987976 
Protein GI121596080 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCCA CTCCCACCGA TCTTGAGGCC CCGAAAAGAC CCGTGCGAGT GCTGCATCTC 
GAGGACTCAA CCGCCGACCA CGCGCTGGTG CGGCTGACGC TGCGGCGCGC CGGGCTGTCC
CATGAGATCC ACCAAGTGGA CTCCCTGGAG GCCTTCACCG GGTGGCTGGA GCGGGAATCG
TTCGACGTGA TCCTGGCGGA CTACCGCCTG CCCGGCTTCA CGGCGCTGGA TGCCTGGCGC
ATCGTGGACC AATGCCCGGG GCACCCGCCC TTCGTGCTGT TGTCCGGCGC GATCGGCGAG
GCCGCCGCGG TGGACGCCAT GCGGCTGGGC TTTGCCGACT ACCTGCTCAA GGACGACATG
GCGCGCCTGC CGCATGTGCT GGCGCGCGCG ATGGAGGTCG CGCAGGCCCG CCGCGCGCGC
GAGGAGGCCA CGGCCGAGTT GGCCGAGTCC CGGCAGCAGT TGGCCGACCT GGCCGAGCAC
CTGCAGACCT CCATCGAGGA AGAACGCGCC GCCATCGCGC GCGAGATCCA TGACGACATC
GGCGGCGCGC TGGCCGCGGT GAAATTCGAC CTGGCCTGGA TCGGCCGCCA CGCCGGTGAG
GACGGCCTGC GCGAACACGC CGGCACCGCC ACCGAGATGC TGCAGCACGC CATCGACGCG
GCACAGCGCC TCATGATGAA CCTGCGCCCG CCCGTGCTGG ACCAGGGCCT CGTCGCCGCC
GTGCGCTGGC TGGCCGAGAC CTTCGAGCGC CGCACGCGCA TCCCCGTGCG CGTCACCGCC
AGCCGCGAGG CGCTGGACGT GCCGCCTGCG CTGCAACTGG TGGCCTACCG CACCGCGCAA
GAGGCGCTGA CCAACGTGCA GAAGCACGCG CAGGCCGGCC AGGTGCGCAT CGATCTGTCG
GACCACGAGG ACGTGCTGAC GCTGGAGGTG ACCGACGACG GCCGCGGCAT GGCGCCCGAG
ATGCGCAAGA AACCCCGCTC CTTCGGCCTG CAGGGCCTGC AGGAGCGCGC GCGGCGCGCG
GGCGGCTGGA TGGACATCAG CAGCCGGCCG GGGCATGGCA CGTCGGTGAT CATGACCGTG
CCGCTAACAT CGCCCGCAGG CGAAGCAGGA GATGTGCAGT GA
 
Protein sequence
MIPTPTDLEA PKRPVRVLHL EDSTADHALV RLTLRRAGLS HEIHQVDSLE AFTGWLERES 
FDVILADYRL PGFTALDAWR IVDQCPGHPP FVLLSGAIGE AAAVDAMRLG FADYLLKDDM
ARLPHVLARA MEVAQARRAR EEATAELAES RQQLADLAEH LQTSIEEERA AIAREIHDDI
GGALAAVKFD LAWIGRHAGE DGLREHAGTA TEMLQHAIDA AQRLMMNLRP PVLDQGLVAA
VRWLAETFER RTRIPVRVTA SREALDVPPA LQLVAYRTAQ EALTNVQKHA QAGQVRIDLS
DHEDVLTLEV TDDGRGMAPE MRKKPRSFGL QGLQERARRA GGWMDISSRP GHGTSVIMTV
PLTSPAGEAG DVQ