Gene Ajs_3753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3753 
Symbol 
ID4672154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3981701 
End bp3982354 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID639840783 
ProductDSBA oxidoreductase 
Protein accessionYP_987938 
Protein GI121596042 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.819118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA TCACGTTCTA CCTGGATTTC GTCTCGCCGT ACGCGTGGCT GGCCTTCGAG 
CGGCTGCCGC AGGTACTGGA GGGGCTGAGC TACCACCTGC ACTACAAGCC GGTGTTGTTG
GGAGCGCTGC TGCAGCAGCA TGCCAACCCC GGGCCGGCCG GCGTGCCGCC CAAGCGCGAC
TGGACGTACC GGCACGCCAC CTGGCTGGGC CATGCACTGG GCTGCGGTCT GGACATGCCG
GCGCGCCACC CCTTCAATCC GCTGCCGTTG CTGCGCCAGG CGCTGGCGTG CAGCGACGAT
GGCACGGTCA ACCGCTATGT CGCCGGCACC GTGCTGCGGC ATGTCTGGCT GGGCGGGCAG
GATGCGCTGG AGCCCGCGCG CCTGGACGTG CTGGCGCAGG CCCTGGCAGA GCAGTTGCGG
CCCGACGCCG AAGGCGCGGG CGCCCTGCCC AAGGCCCTGC TGCGCGCCAA CACGGACGAG
GCGTCGGCCC GTGGCGTGTT TGGCGTGCCG GCCTTTGAGG TGGAGGGGCG CCTGTTCTGG
GGGCTCGACA GCCTGCCTAT GTTGCGCGCC TACCTGGACG GCGACGCGTG GTTTGACGGG
CCGGCATGGG ATGCGGCCCC CGCGGTGCCA TCGGGCCTGC CTTCCGTGCG CTGA
 
Protein sequence
MKHITFYLDF VSPYAWLAFE RLPQVLEGLS YHLHYKPVLL GALLQQHANP GPAGVPPKRD 
WTYRHATWLG HALGCGLDMP ARHPFNPLPL LRQALACSDD GTVNRYVAGT VLRHVWLGGQ
DALEPARLDV LAQALAEQLR PDAEGAGALP KALLRANTDE ASARGVFGVP AFEVEGRLFW
GLDSLPMLRA YLDGDAWFDG PAWDAAPAVP SGLPSVR