Gene Ajs_3728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3728 
Symbol 
ID4672803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3950138 
End bp3950764 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content69% 
IMG OID639840759 
Producthypothetical protein 
Protein accessionYP_987914 
Protein GI121596018 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACC AGCTGTTCGT GTGGGTGGAG CTGCTGGGAA CCTTTGCCTT TGCGGTCAGC 
GGTGCCGTTG CCGCCGGGGG GCGGCGCCTG GACCTGTTCG GGGTGGTGTT CGTCAGCTAC
GTGACGGCCT GTGGCGGCGG CGTCATCCGT GACCTGGCCC TGGGTGCGGT GCCGCCGGTG
GGGCTGTCTG ACTGGCGCTA CCTCGCCACC GTGGTGCTGG CGGCGGGTAT GGGCATCTGG
GCGCGGCCGC TGGTGGAGCG GCTGCAGCAT CCGATCGCCT TCTTCGATGC GGTGGGACTG
GGCTTCTTTG CGGTGGTGGG GGCCCACAAG GCACTGCTCC ACGGCCACAA CGCCGAGCTG
GCCATCCTCC TGGGGATGGT GACGGCCGTC GGCGGCGGCG TGGTGCGCGA CGTGCTGCTC
AACCGCGTAC CGATCATCCT GCACAAGGAG ATCTACGCGC TTCCGGCATT GCTGGCGGCG
GCGATCCAGG TGATGGGGCA GCGCCTGGAA TGGTGGGTGA CGCTGACGCC CTGGTTTGCC
GCGTCGGTCT GCCTGGCCGT GCGTCTGCTG GCGTTGCGGT ATTCGTGGAG CCTTCCGCCG
GTCTGGAGAA AGGCGCCGCC GCAGTGA
 
Protein sequence
MEHQLFVWVE LLGTFAFAVS GAVAAGGRRL DLFGVVFVSY VTACGGGVIR DLALGAVPPV 
GLSDWRYLAT VVLAAGMGIW ARPLVERLQH PIAFFDAVGL GFFAVVGAHK ALLHGHNAEL
AILLGMVTAV GGGVVRDVLL NRVPIILHKE IYALPALLAA AIQVMGQRLE WWVTLTPWFA
ASVCLAVRLL ALRYSWSLPP VWRKAPPQ