| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3692 |
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| Symbol | |
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| ID | 4673458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3907611 |
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| End bp | 3908411 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639840724 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_987879 |
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| Protein GI | 121595983 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.493395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGT CCAGTCATCC AACGGACGCG GTGCGCCTGT CCAAGCGCGT GGCGCAGCAG
TTCCAGTGCT CGCGCACCAC GGCAGAGCAG TACATCGAGG GCGGATGGGT GTCGGTGGAC
GGCCAGGTGG TCGAGCTGCC CGGTGCGCGC GTGGCGTCCG CGCAAAGCGT GGTGCTGGCG
CCGGACGCCA ACCCGATGGA GCTCACGCCC GTCACCCTGC TGCTGCACAA GCCGCCGGGC
TACGAGGCGG GGCTGGGCCT GGTCACTGGC GCGACGCACC GCGCACCGGG CGCGCACGGC
AGCCGCAGCC AGGGCGCGCC GCAAGCCGTC GCGCTGCTCA ACGCGCAGTC GCACCTGCCC
GAAGACGCCG CCGGCACGCG CGTGCTGCTG CGCCATTTCA AACAGCTCGA ATGCTTCACG
CCGCTGCCCA CCGAGGCCAG CGGCCTGGTG GTCTACACGC AGGACCGGCG CGTGGCCCGC
AAGCTGCAGG AAGACATCGA AACGCTGGAA CAGGAGTGCA TCGTGGAGGT GGCAGGCCAG
ATCGCGGACG GCGGCCTGCA AAAGCTCTGC CACGGCCTGA GCTTCAACGG CCGGCCGCTG
CCGCCCATCA AGGTCAGCTG GCAAAGCGAG ACACGCCTGC GCTTCGCGCT CAAGGGCATC
CGCCCCGGCC AGATCCCGGC CATGTGCGAA GCCGTGGGCC TGTCCGTGCG GGCCATCAAG
CGCATCCGCA TCGGCCGCGT GCCCCTGGCC AAGGTGCCCG AGGGGCAGTG GCGCTACCTG
CAGCCGTGGG AGCGGTTCTG A
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| Protein sequence | MTESSHPTDA VRLSKRVAQQ FQCSRTTAEQ YIEGGWVSVD GQVVELPGAR VASAQSVVLA
PDANPMELTP VTLLLHKPPG YEAGLGLVTG ATHRAPGAHG SRSQGAPQAV ALLNAQSHLP
EDAAGTRVLL RHFKQLECFT PLPTEASGLV VYTQDRRVAR KLQEDIETLE QECIVEVAGQ
IADGGLQKLC HGLSFNGRPL PPIKVSWQSE TRLRFALKGI RPGQIPAMCE AVGLSVRAIK
RIRIGRVPLA KVPEGQWRYL QPWERF
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