| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3560 |
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| Symbol | |
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| ID | 4671508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3748130 |
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| End bp | 3750034 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639840591 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_987748 |
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| Protein GI | 121595852 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.533072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC CAAGCTCAGC GCCGGCCCGG TGGCCGGCGT TGCTGTTTCT GCTGATCGGC
CTGGCCCTCT TGCAGGGCTG CAGCCTGCTG CAGCGCCCCT CCTCCGCGCC GCACGACGCA
CCCTCTTCCA TCACCTCCGA GGCGGGCCCG GACTCCGGCC CCGATGCGTT CGCGCTGGAT
GTGCAGGTGG AGGACGACAC CCTGCGCGAG TACCTCACGC GCCATCTGGA GCTGCAGCGC
TTTCGCCAAC TGCCCGACCT GCAGGCGCAT GAACTCACGC GGCTGCTGGG TTCGGCCGAC
GCGAACGCCC GCGACCTGCT GGCCACGCAG GGCTACTTCA GTCCCGAGAT CACCATCGAG
CTGCGCGAGC AGGCCACCGA CGCCGACGCG CCGCCGCGCA CCGTGCTGGT CAGCGTGTCG
CCCGGCCCGC GCACGCACAT CGCCAGCGCC GACATCACGC TGATGGGCGA GGACGGCCAC
GGTGCCGACG CGACCGAGCT CGCGCGCCGC CAGGCCCGGT TGCAGCGCGG CTGGTCGCTG
CCGCCCGGCG AGCCGTTCAC GCAGGAGGGC TGGGACAGTG CCAAGAACCA GGGCCTGCGC
GATCTGCAGG CGCGCCGCTA CCCCACGGCG CGCATCGCCA GCAGCCGCGC CGAGGTGGAC
GCCGACCGCG CCGAGGCCAA GCTGCAGGTG GCCTACGCGC CTGGCCCGGC TTACCGTTTT
GGCACCCTGC AGATCCAGGG GGGCGAGCGT TACGACAACG AGGGCATGCG CCGCATTGCG
CGCCTGCCCA CGGGCGACGA CTACAGTGAG GCGCGCCTGC TGGACACCCA GCAGCGCCTG
GCCAGCAGCG GCTATTACGA CGCGGTGTTC CTCACGCTGG ACACCGAGCA CGGCGACCCG
CAGTCCGCCC CCGTGATTGC CCAGGTGCGC GACGCACCGC TGCAAAAAAT GGTCTTCGGC
GTCGGTATCT CCACCGACAG CGGGCCGCGC CTGTCCATGG ACCACACGCA CAACCGCCTG
CCGGGCTTGG GCTGGCGCGC GGTGAGCAAG GTGGCGGTGG ACAACAAGCG CAAGCTGCTG
TCCACCGACT GGACCGGGCT GCCGCATGCG AACGGCTGGC GCTGGTTCAC CGGCCTGCAG
CTGCAGCGCG AGGCCACGGG CAGCTACGAC GTGGACAGCT CGCGGCTGCG CGCCGGGCGC
ACCAAGAGCA CGGACCGCAT CGACCGCAGC TACTTCCTGC AGCACGACAC GGCCAAGAAC
CGCGGCGAGG ACGCGCCGCC GTCCAGCAGC GCGATCTCCG CCAACTACGG CTGGACGGGG
CGCTACTTCA ACAGCAATAC CAACCCCACG CGCGGCTGGG GCCTGGCGGC CGAGCTGGGC
GTGGGCACCA CGCTGCGCCC GGAGCGCGAC CCCTTCGTGC GCACCCTGCT GCGCTGGCAG
TCCTTCGTCG GGCTGGGCCG CGTGGACCTG GGGAACAACG TGCGCCGCGG CAGCCGCTTG
TCGCTGCGCC TGGAGGGCGG CGCGGTGCTG GCGCGCGACG GCGCCGACAT CCCCGTTACC
CAGCTGTTCC TGACCGGCGG CGACACCACC GTGCGCGGCT ACGGCTACCG CAGCATCGGC
GCGCGCACCG ACGCGGACAA GCTCTTCGGC GGGCGCTACA TGGCCGTGGG CAGCGCCGAA
TGGCAGCGCC CCATCACCGT GCGCGGCAAC CGCACCGACT TTGAGAGCGC CCTGTTCATC
GACGCCGGCG CCGTGGCCGA CACACCTGGC GATCTCACGG CGCGCGTGGG CGTGGGTGCA
GGCCTGCGCT GGCAAAGCCC GGTGGGCCCG CTGCAGGCCG ACCTGGCCTA TGGCCTGCAC
ACGCACCAGG TACGGCTGCA CCTGCGGCTG GGCTACACGT TCTGA
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| Protein sequence | MTKPSSAPAR WPALLFLLIG LALLQGCSLL QRPSSAPHDA PSSITSEAGP DSGPDAFALD
VQVEDDTLRE YLTRHLELQR FRQLPDLQAH ELTRLLGSAD ANARDLLATQ GYFSPEITIE
LREQATDADA PPRTVLVSVS PGPRTHIASA DITLMGEDGH GADATELARR QARLQRGWSL
PPGEPFTQEG WDSAKNQGLR DLQARRYPTA RIASSRAEVD ADRAEAKLQV AYAPGPAYRF
GTLQIQGGER YDNEGMRRIA RLPTGDDYSE ARLLDTQQRL ASSGYYDAVF LTLDTEHGDP
QSAPVIAQVR DAPLQKMVFG VGISTDSGPR LSMDHTHNRL PGLGWRAVSK VAVDNKRKLL
STDWTGLPHA NGWRWFTGLQ LQREATGSYD VDSSRLRAGR TKSTDRIDRS YFLQHDTAKN
RGEDAPPSSS AISANYGWTG RYFNSNTNPT RGWGLAAELG VGTTLRPERD PFVRTLLRWQ
SFVGLGRVDL GNNVRRGSRL SLRLEGGAVL ARDGADIPVT QLFLTGGDTT VRGYGYRSIG
ARTDADKLFG GRYMAVGSAE WQRPITVRGN RTDFESALFI DAGAVADTPG DLTARVGVGA
GLRWQSPVGP LQADLAYGLH THQVRLHLRL GYTF
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