| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3470 |
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| Symbol | |
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| ID | 4674265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3664910 |
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| End bp | 3667801 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639840503 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_987660 |
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| Protein GI | 121595764 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.873157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.153183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG CACCGCACAC CGGCGCAGGC GCCGTGCCGT TCGAGCTCGA CGGCGAACTC
TTGCAGGCCC TTCCGGGCGA AACCCTGTGG CAGGCCGCGC GCCGCTACGG CGTGCAGATC
CCCCACCTGT GCCACACCGA TGGCCTGCGG CCCGACGGTA ACTGCCGCGC CTGCGTGGTG
GAGATCGAAG GCGAGCGCAC GCTGGCGCCC AGCTGCTGCC GCGCGCCCAC GCCCGGCATG
CGCGTGCACG CCCAGAGCCC CCGCGCGCTC AAGAGCCAGC AGATGGTGCT GGAACTGCTG
CTGTCCGACA TGCCAGAGAC CGGCTACAAG TGGAACGACG CTACAAAAAT AATAGCTGAT
AGCGCTTGCC AGGAGAGCGT TGGAGCACAA TTTGACCAAG TACCAACGCC CCCGGGGCAG
CACGGCGAGT TGAGCGCCTG GGCCGATGCG CTGGGCGTGG CCGTGCGTCC CGCGCTGGCC
GCGCTGCGCC GCGCGCAGCC CGCGCCCGAC CTGAGCCACC CGGCCATGGC CGTGCACCTG
GACGCGTGCA TCCAGTGCAA CCGCTGCGTG CGCGCCTGCC GCGAGGAACA GGTCAACGAC
GTGATCGGCT ATGCACTGCG CGGAGCCGAC AGCAAGATCG TCTTCGACCT GGACGACCCC
ATGGGCGCCA GCACCTGTGT GGCCTGCGGC GAATGCGTGC AGGCCTGCCC CACGGGCGCG
CTGAGTCCCA AGACCCACAT CGGCCCGCAG AAGGTGGACC GCACGGTGGA CTCGGTCTGC
CCGTTCTGCG GCGTGGGCTG CCTCGTCACC TACCACGTGA AGGACGAAAA AATCGTGCGC
GTGGACGGCC GTGACGGCCC GGCCAACCGG GGGCGCCTGT GCGTGAAGGG GCGCTTTGGC
TTTGACTACG CGCACCACCC GCAGCGCCTC ACGGTGCCGC TGGTGCGCAA ACCTGGCGTT
CCCAAGGACT GGCAGGGCGC TGTGAGGCCC GAGGACTGGC GCGAGGTCTT CCGCGAGGCG
ACCTGGGACG AGGCACTGCA GCGCGCCGCA GGCGGACTGC GTGCGCTGCG CGATGCGCAC
GGCCCCAAGG CGCTGGCGGG GTTTGGCTCG GCCAAGGGCA GCAACGAAGA GGCCTACCTG
TTCCAGAAGC TGGTGCGCAC CGGCTTTGGC AGCAACAACG TGGACCATTG CACGCGCCTG
TGTCACGCCT CCAGCGTGGC GGCGCTGCTG GAGGGCGTGG GCTCGGGCGC GGTGAGCAAC
CCGGTGAGCG ACGTGGCGCA TGCCGAGGTT ATTCTGGTGA TCGGCTCCAA CCCCACATCC
AACCACCCCG TGGCCGCCAC ATGGATCAAG AATGCCGCCC GGCGGGGTGC AAAGATCGTG
CTGGCCGACC CGCGCGTGAC CGACATCGGG CGCCACGCCT GGCGCGTGCT GCAGTTCCGG
CCCGACACCG ATGTGGCCGT GCTCAACGCG CTGATCCACA CGGTGATCGA GGAGGGCCTG
GCCGACGAGG CCTTCATCCG TGACCGTGCG CTCAACTACG AGGCCCTGCG AGAGAACGTG
CGCGCCTACA GCCCTGAGGC CATGGCGCCG CTCTGCGGCA TTCCCGCGGA CACGCTGCGT
GAGGTGGCGC GCGCGTTCGC CACGGCCAAG GCGTCGATGG TCCTCTGGGG CATGGGCGTG
AGCCAGCATG TGCATGGCAC CGACAACGTG CGCTGCCTGA TTGCCCTCGC CACCGTCACC
GGGCAAATCG GCCGGCCCGG CACGGGCCTG CACCCGCTGC GCGGCCAGAA CAACGTGCAG
GGCGCAAGCG ACGCGGGCCT GATCCCGATG ATGTTCCCCA ACTACCAGCG CGTGGACAAC
GCCGAGGCGC GCGCGTGGTT CGAGCAGTTC TGGGGCTTGC CGCTGGACGA CGCGCCGGGT
TACACCGTGG TCGAGATCAT GCACAAGGCC CTGGCCCATG AGGCCGACCC GCACAAGGTG
CGCGGCATGT ACATCATGGG CGAGAACCCG GCCATGAGCG ACCCTGACCT GAACCATGCG
CGCCAGGCGC TCGCGAGCCT GGCGCACCTC GTGGTGCAGG ACATCTTCTT GACCGAAACC
GCCTGGCTGG CCGACGTGGT GCTGCCCGCC AGCGCCTGGC CCGAGAAGAC CGGCAGCGTG
AGCAACACCG ACCGCATGGT GCAGCTGGGC CGGCGCGCGC TCACGCCACC GGGTGACGCG
CGGCCCGATC TGTGGATCGT GCAACAGATG GCGAAGGGCA TGGGCCTGGC CTGGGACTAC
GAGGGCGCAG AAGCTGGCGT GGCTGCCGTC TACGAGGAAA TGCGCCAGGC CATGGCCGGC
GCCATCGCGG GTATCAGTTG GGACCGGCTA GAGCGCGAGT CCAGCGTGAC CTACCCCTGC
CTCTCGGCCG AGGACCCGGG CCAGCCCATC GTATTCACCG AGCGCTTTCC CACCCCCACG
GGCCGTGTGA CGTTGGTGCC GGCCGACATC ATCCCGGCCG ACGAGCGGCC CGATGCCCAC
TACCCGCTGG TGCTCATCAC GGGCCGCCAG TTGGAGCACT GGCATACGGG CAGCATGACG
CGGCGATCGG CCGTGCTGGA CGCCATCGAG CCGCACGCCA CGGCCTCGCT GCACGGCGAC
GAACTGGCGC GCCTAGGGCT GGCGCCGGGC GACTGGGCGG CGATCCGCTC GCGCCGTGGT
GCCGTGCAGG TGCGTGTGCG CCGCGACGAC GGCACGCCGC GCGGTGCGGT GTTCATGCCG
TTTGCCTATG TGGAAGCGGC GGCCAACCTG CTCACCAATG CGGCGCTGGA CCCGTTCGGG
AAGATCCCCG AGTTCAAGTA TTGCGCCGTG GCCGTGCGGG GCATTGCGCC GCCGCAGGGG
CAGGGCGGCT GA
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| Protein sequence | MSAAPHTGAG AVPFELDGEL LQALPGETLW QAARRYGVQI PHLCHTDGLR PDGNCRACVV
EIEGERTLAP SCCRAPTPGM RVHAQSPRAL KSQQMVLELL LSDMPETGYK WNDATKIIAD
SACQESVGAQ FDQVPTPPGQ HGELSAWADA LGVAVRPALA ALRRAQPAPD LSHPAMAVHL
DACIQCNRCV RACREEQVND VIGYALRGAD SKIVFDLDDP MGASTCVACG ECVQACPTGA
LSPKTHIGPQ KVDRTVDSVC PFCGVGCLVT YHVKDEKIVR VDGRDGPANR GRLCVKGRFG
FDYAHHPQRL TVPLVRKPGV PKDWQGAVRP EDWREVFREA TWDEALQRAA GGLRALRDAH
GPKALAGFGS AKGSNEEAYL FQKLVRTGFG SNNVDHCTRL CHASSVAALL EGVGSGAVSN
PVSDVAHAEV ILVIGSNPTS NHPVAATWIK NAARRGAKIV LADPRVTDIG RHAWRVLQFR
PDTDVAVLNA LIHTVIEEGL ADEAFIRDRA LNYEALRENV RAYSPEAMAP LCGIPADTLR
EVARAFATAK ASMVLWGMGV SQHVHGTDNV RCLIALATVT GQIGRPGTGL HPLRGQNNVQ
GASDAGLIPM MFPNYQRVDN AEARAWFEQF WGLPLDDAPG YTVVEIMHKA LAHEADPHKV
RGMYIMGENP AMSDPDLNHA RQALASLAHL VVQDIFLTET AWLADVVLPA SAWPEKTGSV
SNTDRMVQLG RRALTPPGDA RPDLWIVQQM AKGMGLAWDY EGAEAGVAAV YEEMRQAMAG
AIAGISWDRL ERESSVTYPC LSAEDPGQPI VFTERFPTPT GRVTLVPADI IPADERPDAH
YPLVLITGRQ LEHWHTGSMT RRSAVLDAIE PHATASLHGD ELARLGLAPG DWAAIRSRRG
AVQVRVRRDD GTPRGAVFMP FAYVEAAANL LTNAALDPFG KIPEFKYCAV AVRGIAPPQG
QGG
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