| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3345 |
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| Symbol | |
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| ID | 4674096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3537411 |
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| End bp | 3539288 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639840385 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_987543 |
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| Protein GI | 121595647 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.049503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA CCATGCACGT GCAGGGCGAG CTCGCGCCTG CCCAATCCCC TATGGCCGCT
TCGATTGAGG CGCCTGTTTC TCCTATCACC GCCGCGCCCG CTCTGCCCGC CGGCTTCATC
GAACTGGGCC TTGCGCCCGA ACTGGTGCAG GCTGTGGCCG ACCTCGGCTA CACCGAGCCC
ACGCAGGTGC AGACTCGCGC GATTCCCTTG GCCATGGGCT CGGGCGATGA CGCGAGCTTC
ATCGATCTGA TGGTCTCCAG CCAGACTGGC AGCGGCAAGA CTGCGGCCTT CCTGCTGCCC
GTGCTGCACA CGCTGATCCG CCAACAGGCC GAGGCCGAAG TCGCCGAGCG CGCCGCCTTC
GAGCGCGCCG CCGCCGAGGC GGCCGCGCGT GGCGAGGCCC CCCCAAAGCG CCCCAAGCGC
AAGAACCCCA CGCAGGCGCG CAACTTCAAG GCGGCGACGC CCGGTGCGCT GGTGCTGTGC
CCCACGCGCG AACTGGCGCA ACAGGTGGCG CACGATGCCA TCGATCTGGT CAAGCATTGC
AAGGGCCTGC GCATCGCCAA CGTGGTGGGT GGCATGCCCT ACCAGTTGCA GATCGCCAAG
CTGCAGAATG CCAACCTGGT GGTGGCGACG CCGGGCCGTC TGCTGGACCT GCAGCGTTCG
CAGCAGATCA AGCTGGACCA GGTGCAGTTC CTGGTGGTCG ATGAGGCCGA CCGCATGCTG
GATCTGGGCT TCTCCGACGA CCTGGCCGAG ATCAACCAGC TCACCGCCCA GCGCAAGCAG
ACCATGATGT TCAGCGCCAC CTTCGCGCCG CGCATCCAGC AGCTCGCCAT GCGGGTGATG
CACGACAACG GCGCGTCGGT GAAGAAGATC CAGATCGACA CGCCGCAGGA AAAGCACGCC
AACATCAAGC AGATGCTGTA CTGGGCCGAC AACGCGCAGC ACAAGCGCAA GCTGCTGGAC
CACTGGCTGC GCGATGCCTC CATCGACCAG GCCATCGTGT TCGCCAGCAC CCAGGTGGAG
TGCGATGGTC TGGCCAATGA CCTGCAGCAG GAAGGTTTCA GTGCCGTGGC TTTGCACGGC
GCCCTGAGCC AGGGCCTGCG CAACCGCCGC CTGATGGCGC TGCGCAATGG CCAGGTGCAG
ATCCTGGTGG CGACCGACGT GGCCGCGCGC GGCATCGACG TGCCGACCAT CACCCACGTC
TTCAACTTCG GCCTGCCCAT GAAGGCCGAG GACTACACGC ACCGCATCGG CCGTACGGGC
CGCGCCGGCC GCGACGGTTT GGCCGTGACC TTTGCCGAGT TCCGCGACCG CCGCAAGATC
TTCGACATCG AGGGCTACAG CCGCCAGCAG TTCAAGGCCG AGGTGGTCGC AGGCCTGGAG
CCTACCCAGC GCTTCCCGCA AGGCGGCCGC GCAGACTTCG GCGGTCGTGG CGGGCGTGAT
GGCCACCGTG GCCCGCGCGA GCAGCGCTTT GGCCGCGGCG GCAGCGAGCG CGGCTTTGGT
GATCGTGGTG GCTATGGCGA CCGTGACCCA CGTGGCAGCT TCGGCGACCG TGGCGGCTTC
AATGACCGTG GCGGCTTTGC CGACCGCGGC CCGCGCGGCG CAGCCCCCCG CTCTGGCGAG
GGCTATGGCG CACCGCGCGG TGGCGATCGT GGCAACAGCT TCGGCGGCCG CCGCGACGGT
GAAGGCTATG GCCGCAAGAG CGGGTTTGGC GAAGCCTCCC GGTTTGGCGA CGCCGGCCGC
CATGGTGGTG GCCGCGGTGA CGCTGCAGCA CCCCGCGCAG ACTTTGGCCG CAAGCCCGCG
TTTGCCAAGC CGCAGGGCGC GGGCAAGCCG TTCGTACCCC ACGGTGCCGG CAAGCGCCCG
GCGCGCAACG ACCGCTAA
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| Protein sequence | MTDTMHVQGE LAPAQSPMAA SIEAPVSPIT AAPALPAGFI ELGLAPELVQ AVADLGYTEP
TQVQTRAIPL AMGSGDDASF IDLMVSSQTG SGKTAAFLLP VLHTLIRQQA EAEVAERAAF
ERAAAEAAAR GEAPPKRPKR KNPTQARNFK AATPGALVLC PTRELAQQVA HDAIDLVKHC
KGLRIANVVG GMPYQLQIAK LQNANLVVAT PGRLLDLQRS QQIKLDQVQF LVVDEADRML
DLGFSDDLAE INQLTAQRKQ TMMFSATFAP RIQQLAMRVM HDNGASVKKI QIDTPQEKHA
NIKQMLYWAD NAQHKRKLLD HWLRDASIDQ AIVFASTQVE CDGLANDLQQ EGFSAVALHG
ALSQGLRNRR LMALRNGQVQ ILVATDVAAR GIDVPTITHV FNFGLPMKAE DYTHRIGRTG
RAGRDGLAVT FAEFRDRRKI FDIEGYSRQQ FKAEVVAGLE PTQRFPQGGR ADFGGRGGRD
GHRGPREQRF GRGGSERGFG DRGGYGDRDP RGSFGDRGGF NDRGGFADRG PRGAAPRSGE
GYGAPRGGDR GNSFGGRRDG EGYGRKSGFG EASRFGDAGR HGGGRGDAAA PRADFGRKPA
FAKPQGAGKP FVPHGAGKRP ARNDR
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