Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3273 |
Symbol | |
ID | 4673750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3459089 |
End bp | 3459712 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639840313 |
Product | anti sigma-E protein, RseA |
Protein accession | YP_987472 |
Protein GI | 121595576 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.221066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.389812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGACG ACATGATGAT GCGAGAACAG CTGTCGGCTT TGGCCGATGG GGAGTTGCAG GGCGAAGAAT TTGCGCACGC GCTCACCTAT GCCGCGAACG CCGAGGGGCG GGCGACGTGG CAGCTCTACC ATTTGATAGG TGACACCCTG CGCAGTTCTG AAGCAGCCGG TATGGGAGAC CTTGAACTCG TAGACTGCCT GCGCACGCAA CTGGCGCGCG AACCGGCGCC CCGCTTGGCG GCCGTGGAAG TAGGTCACGT GGCCTCTATG AAGGCGGGGC GGACGAAAGA CAACGCAGCC AACGCCGCAG TGTTCCGCTG GAAGGTGGCG GCAGGGTTCG CGTCGTTTGC CGCAGTCGCG GCTGTTGGAT GGAGTGTCTA TCTGGGCGCC GAAGGTGACG GCCGCGCGGC AGGCGCGCAA TTGGCGGCGG CCCAGCCAGC CATGACGGCC ACGGCGCCCG CTCTGCTGGT CACAGCCGCC GGCCCTGATG GGCAACAGGT CATGTTGCGT GATCCGCGTC TGGATGAGTT GCTCGCAGCG CACAAGCAGT TTGGCAGCAC GACTGCACTG CAGATGCCGG CAGGCTTCCT GCGGAACGCC ACGTTTGAAG CGCCTGCGCG CTGA
|
Protein sequence | MNDDMMMREQ LSALADGELQ GEEFAHALTY AANAEGRATW QLYHLIGDTL RSSEAAGMGD LELVDCLRTQ LAREPAPRLA AVEVGHVASM KAGRTKDNAA NAAVFRWKVA AGFASFAAVA AVGWSVYLGA EGDGRAAGAQ LAAAQPAMTA TAPALLVTAA GPDGQQVMLR DPRLDELLAA HKQFGSTTAL QMPAGFLRNA TFEAPAR
|
| |