Gene Ajs_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3246 
Symbol 
ID4671976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3430505 
End bp3431209 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID639840286 
Producthypothetical protein 
Protein accessionYP_987445 
Protein GI121595549 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACACA TTGAAACCTA TTTGCTGGGC GAGGCTTTCA GCGACGATTT GCCTTTCAGG 
CCGGGGATTA TCGGACATGC CCAGCCACGC GGTGATTTGC TGGCCGGCTG GGTCGCGCAG
CAGTGCGTGC TGCATGTGGG CTTTGCCGAC CATGCACCGC TGATTGCACG TCGCGCCTCC
GACGGCAGTT GGTTGCACGC GCTTCTCAGC CGCAGCGCAC GGATCTGCCA TGGTATCGAC
ATCAACGCCA CCGCTGTGGA CACGGCGCGC AGCCTCGGTT TTGACCACGT GCAGCAGCTC
GACGTGTTCG CCACCGAGGC CCCGCAGGTG CTGGCCCGGT GTGCGCCCGA CATGGTGCTG
GTGCCTGATG TAATTGAGCA CCTGCCTGAC CCCGCCGCGT TCCTGCGTCG GCTGGCGCAG
TGCCTGCCAG AGGCAGAGTT CGTCGTCAGT GTGCCCAATG CGTTGTCCCT GCGCAATGCG
CTTCACGGCG TGAGCGGGGT GGAGCATGTC AACACCGACC ATCGGGCGTG GTTTTCACCC
TTCACACTAC TGAAGGTGCT GGCGGATGCA GGGCTAGTGG GCGCCGAACT GCACAGCTGC
CAGGTGGCGG CGCCGGGGAC GATGAAGGGA CGACTGTTGC ATCGGCTGGC AGTGCGCAGG
CCGTTGTGGG CGGATGTGCT GGTTGCGCGA GTGAAGGCAC GTTGA
 
Protein sequence
MPHIETYLLG EAFSDDLPFR PGIIGHAQPR GDLLAGWVAQ QCVLHVGFAD HAPLIARRAS 
DGSWLHALLS RSARICHGID INATAVDTAR SLGFDHVQQL DVFATEAPQV LARCAPDMVL
VPDVIEHLPD PAAFLRRLAQ CLPEAEFVVS VPNALSLRNA LHGVSGVEHV NTDHRAWFSP
FTLLKVLADA GLVGAELHSC QVAAPGTMKG RLLHRLAVRR PLWADVLVAR VKAR