| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3186 |
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| Symbol | |
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| ID | 4672280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3368694 |
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| End bp | 3369590 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639840226 |
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| Product | hypothetical protein |
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| Protein accession | YP_987385 |
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| Protein GI | 121595489 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.704691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGTT CTGCAGCACC TTTTCCGCAG CGCCAACGCG GCGTCACCCT CATCGAACTG
CTCGTCGGTC TCATCATTGG GCTGCTCACC GTCGCCGTGG CAATGGGAGC GCTCATGGTC
TCTCGCGGCG TCAGTGGCAC AGTCAGTGAC GCCAGCGAAA TTCAGCAGCA AGGCTCCTAC
GCCATGCGCG TCATCGGCCA GCAAATCCGC CAAGCCGGTT CTCTCAAGTT GGATCTATTC
CCCTCTGGAG CGATGGCGGG AGCAAGCGAC ACCTTGGAAC ATGTGGTGCC AGTCGCCCTC
GAGGCGCGCA CACCCCCGTC AGGCAGCGAC GCCGGCTGGG ACCCAGCCAC CGACACAGTC
GGTTTCTACA CGCCATCGGG CAAGCCCGGC GGTCCCATAT TCGGCTTTGC GAGTTTCACA
GAGAAAGTCA CCACGGGCGC TGCCCCCGAA TATCAGGCCC ATCAGGCATT CAATTGCCTA
GGCCGCGCGG GAACCACAGT CACACGCAGC AACTTCCGGC TGCAAGACGG CGTACTGCGC
TGCGGCGATG GCGGCGCTGA TGACGAGCCC ATTGTTCGCA ATGTGGCAGC CTTTCAGGTG
CGCTACGTGA TGCAGGACAT CACGACCACC CCCGGCATCC CGCAAGTCGA ATACGTGGCC
AGCCACAGCG CAGTGGAATC AGCCACCAAT GGATGGGCCA AGGTGCAGGC CGTAGAGGTT
TGCCTGGAGT TGTACGGAAA CGAGCCCATC GACCTTCCGG CGGGCAGTAC CTATACAGGA
TGTTCCGGTC CCGTGGCCTA CAGCACGCTC ACGGGCGAAC GGGCACGTCG CCTGCATCTC
GCTTTCCGCA GCGTGTTCCA GTTGCGCGGC CAAGGCCAAA CAGGCGCGGT GCTTTAA
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| Protein sequence | MTRSAAPFPQ RQRGVTLIEL LVGLIIGLLT VAVAMGALMV SRGVSGTVSD ASEIQQQGSY
AMRVIGQQIR QAGSLKLDLF PSGAMAGASD TLEHVVPVAL EARTPPSGSD AGWDPATDTV
GFYTPSGKPG GPIFGFASFT EKVTTGAAPE YQAHQAFNCL GRAGTTVTRS NFRLQDGVLR
CGDGGADDEP IVRNVAAFQV RYVMQDITTT PGIPQVEYVA SHSAVESATN GWAKVQAVEV
CLELYGNEPI DLPAGSTYTG CSGPVAYSTL TGERARRLHL AFRSVFQLRG QGQTGAVL
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