Gene Ajs_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3152 
Symbol 
ID4673665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3332493 
End bp3333206 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID639840194 
Producthypothetical protein 
Protein accessionYP_987353 
Protein GI121595457 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.900367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGAA CTATAAAAAC AATAGCTGCT TGCGCACTGA TGGCGGGCGC TGTGGCCGCT 
TACGCTCAGA ATCCTTCGGC GCCGCCGCAG AACGTGCTGC AGCTCTCCGC ATCGGGCACG
GTGCAGGTGC AGCAGGACTT GCTGGTGCTG ACGCTGGCCG CCACCAAGGA AGCCGCGGAC
GCCGCAGGCG TGCAAACGCA ACTCAAACAG GCGCTGGACG CCGCGCTGGC CGAAGCCCGC
CGCGCCGCCC AGCCGCAGCA GATGGACGTG CGCACGGGGG CCTTCGGCAT GTACCCGCGC
TATGGCAAGG ACGGCAAGAT CACCGGCTGG CAGGGCCGCG CCGAGCTGGT GCTGGAAGGG
CGTGACTTCC CGCGCATCAC GGCCACGGCG GGCAAGATCC AGAGCATGTC CATCAGCCAG
ATCGCATTCG ACTTGTCGCG CGAGGCGCGG GCCAAGGTGG AGACCGAGGC CCAGGCGCAG
GCCATCGAGG CCTTCAAGGC ACGCGCCTCC GAACTGGCGC GGGGCTTTGG TTTTGGCGGC
TACTCGCTGC GCGAGGTGGC GGTGAACAGC AATGAGATGT CGCCCGGCCC GCGCCCGCGC
ATGATGGCCA TGGAGGCCAA GGCGGCATCC TATGCGTCCG ACGCTCCCGT GCCTGTGGAG
GCCGGCAAGG CCCAGGTGGT GGTGACGGTG GCTGGCTCGG TACAGCTCAA GTGA
 
Protein sequence
MQRTIKTIAA CALMAGAVAA YAQNPSAPPQ NVLQLSASGT VQVQQDLLVL TLAATKEAAD 
AAGVQTQLKQ ALDAALAEAR RAAQPQQMDV RTGAFGMYPR YGKDGKITGW QGRAELVLEG
RDFPRITATA GKIQSMSISQ IAFDLSREAR AKVETEAQAQ AIEAFKARAS ELARGFGFGG
YSLREVAVNS NEMSPGPRPR MMAMEAKAAS YASDAPVPVE AGKAQVVVTV AGSVQLK