| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3141 |
|---|
| Symbol | |
|---|
| ID | 4673995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3320670 |
|---|
| End bp | 3321671 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639840182 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_987342 |
|---|
| Protein GI | 121595446 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0168264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTCG ATACATTCCC CGCACCCCGC CGCCTCACGC GCCGCCAGGC GCTGGCCTGG
AGTGCTGCCC TCTGTGCGCC CGCGCTGGCG CATGCGCAGG GCCCCGGTGC GGCCGACCGG
CCGCTGCGCG TGATCCTGCC GCTGTCGGCC GGCTCGGGCG CGGACGGTGC CATCCGCGCC
ATTCAGGCCA GCCTGTCCAG GGCGCTGGGC CAGGCGGTGG TGATCGAGAA CCTGCCCGGC
GCGGGCGGCA TCACGGGCAC CACGCAGCTC GTGCGCGCGC CCAAGGACGG CTCGGTGATC
GGCGTGGTGT CCAACAACCA CGTGGTGAAC CCGCATGTGT ACCCATCGGC GCCTTTCGAT
GCCATCGAGG ACATCACGCC CATCACCGTG ATCGGCGCCA CGCCCTTCGT GCTCGTCGCC
CATCCCTCGG TGCAGGCCCG GAACGCGCGC GAACTCATCG CGCTCGCCAA GGCCAAGCCC
GGGGTGCTCA ACTACGGCTC GTCGGGCAAC GGCACCATCC TGCACCTGGG CGCGGCCATG
TTCGTGGACC AGGCGCAGCT GGACATCAAG CACATCCCCT ACCGCGGCAT GGGCCCGCTG
ATGAATGACA TCCTGGGCGG GCAGGTGCAG CTGGGCGTGG TGGCCGTGGC GCCGGCGGCC
GCGCACATCA AGTCCGGCAG CCTGCGCGCG CTGGGCGTGA CCACGGCCGC CCGCGTCCCC
TCGCTGCCCG GCGTGCCCAC CCTCGCCGAA CAGGGCCTGC CGCGCTATGA ACTGGAGGGC
TGGATCGCCG CCGTGGCGCC TGCCGGCGTG CCCCCGGCGG ACGTGGCGCG GCTGTTCCAC
GGCTTCAAGG CCGCGCTGGC CATGCCCGAG GCGCGCGACG CGCTGGTGGC GCAGGGTTAT
GAGATCAAGC TCACGCCGCC CGATGTTTCG GCCGCGTTCT TTCGCAGCGA ACTGGCGCGC
ATGGGGCAGG TGGTGAAGAG CGCCAGCGTG AAGATGGACT AA
|
|---|
| Protein sequence | MPLDTFPAPR RLTRRQALAW SAALCAPALA HAQGPGAADR PLRVILPLSA GSGADGAIRA
IQASLSRALG QAVVIENLPG AGGITGTTQL VRAPKDGSVI GVVSNNHVVN PHVYPSAPFD
AIEDITPITV IGATPFVLVA HPSVQARNAR ELIALAKAKP GVLNYGSSGN GTILHLGAAM
FVDQAQLDIK HIPYRGMGPL MNDILGGQVQ LGVVAVAPAA AHIKSGSLRA LGVTTAARVP
SLPGVPTLAE QGLPRYELEG WIAAVAPAGV PPADVARLFH GFKAALAMPE ARDALVAQGY
EIKLTPPDVS AAFFRSELAR MGQVVKSASV KMD
|
|---|
| |