| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3133 |
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| Symbol | |
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| ID | 4673461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3308469 |
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| End bp | 3309584 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639840174 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_987334 |
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| Protein GI | 121595438 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.585078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.756341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC AGACCAAGAC CCCAGGCCGC CGAAACCTAC TCAAGGGTGC TGCGGTTGCC
GCGGGAGCCA TGTCCGTGCC CATGATCAGC ACGGCCCAGA CCACGGTGTT CCGATTCCAG
AGCACCTGGC CCGCCAAGGA TATCTTTCAC GAGTTCGCGG GAGACCTGGC CAAGAAGATC
AACGACATGG CGGGCAGCCG CCTGAAGATC GAGGTGTTGC CCGCGGGCGC CGTGGTGCCG
GCCTTCCAGT TGCTGGATGC CGTGGCCAAG GGCACGCTGG ACGGTGGCCA TGGCGTGGTG
GCCTACTGGT ACGGCAAGAA CCAGGCCGTG GCGCTGTGGG GCTCGGGCCC GGCCTTTGGC
CTGGATGCCA ACGGTGTGCT CGCGTGGCAT TACTACGGCG GCGGTAAGGA GCTGCTCGAC
GAGATCTACA AGAGCCTGAA CCTGGACGTG GTCTCCAAGC TCTACGGCCC CATGCCCACG
CAGCCGCTGG GCTGGTTCAA GAAGCCGGTG GCACGCGTGG AAGACCTCAA GGGCCTGAAG
TTCCGCACCG TGGGGCTGGC GGTGGACGTG TTCACCGAGA TGGGCGTGGC CGTGAACCCG
CTGCCCGGCG GCGAGATCGT GCCCGCGCTG GACCGCGGCC TGCTGGATGC GGCCGAGTTC
AACAACGCCT CCAGCGACCG CGTGCTGGGC TTTCCCGACG TGGCCAAGAA CTGCATGCTG
CACAGCTTCC ACCAGTCCAG CGAGCAGTTC GAAGTGCTGT TCAACAAGAG CAAGTACGAC
GCGCTGTCGT CGGAGCTGAA GGCGGTCATC GACTACGCCG TGCAGGCCGC CAGCGCCGAC
ATGAGCTGGA AGGCCGCCGA CCGCTACGCC AAGGACTACG CCGAGATGCA ATCCAAGCAG
GGGGTGAAGT TCTACAAGAC GCCGGACGCC ATCCTGCGCG CGCAGTTGGC CGCCTGGGAC
AAGGTCACGG CCAAGAAAGC CGAAGAGAAC GCCATGTTCA AGAAGGTGAT GGACTCCATG
CGCACCTTTG CGCAGAGGAG CGGCCGCTGG AAGAACGACA CCGACGTCGA CTTCAAGATG
GCCTGGAACC ACTACTTCGC GCAGCGCAAG AGCTGA
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| Protein sequence | MTEQTKTPGR RNLLKGAAVA AGAMSVPMIS TAQTTVFRFQ STWPAKDIFH EFAGDLAKKI
NDMAGSRLKI EVLPAGAVVP AFQLLDAVAK GTLDGGHGVV AYWYGKNQAV ALWGSGPAFG
LDANGVLAWH YYGGGKELLD EIYKSLNLDV VSKLYGPMPT QPLGWFKKPV ARVEDLKGLK
FRTVGLAVDV FTEMGVAVNP LPGGEIVPAL DRGLLDAAEF NNASSDRVLG FPDVAKNCML
HSFHQSSEQF EVLFNKSKYD ALSSELKAVI DYAVQAASAD MSWKAADRYA KDYAEMQSKQ
GVKFYKTPDA ILRAQLAAWD KVTAKKAEEN AMFKKVMDSM RTFAQRSGRW KNDTDVDFKM
AWNHYFAQRK S
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