| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3100 |
|---|
| Symbol | |
|---|
| ID | 4671851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3269636 |
|---|
| End bp | 3269980 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639840142 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_987302 |
|---|
| Protein GI | 121595406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.195902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGC TTGAGGCGCG CCCCGAGGCG TCGCGCCTGT TCGTTTTTGG CTCTCCGCTG
CTTGCGCTGG CGATCACGGT GCTGATCGGC GTGCTGCTGT TTGCGGCCCT GGGCAAGGAC
CCGGTGCGCG GGCTGCAGGT GTTCTTCTGG GAGCCTATCA AGTCGCCCTA TGCGTTGGGC
GAATTGGCCG TGAAAGCCAC CCCGTTGCTG CTCATCGCGC TAGGACTGGC GGTGTGTTTT
CGCTCCAATG TCTGGAACAT TGGCGCGGAG GGGCAGTTCG TGATCGGCGC CGTGGCTGCG
GGCGGCGTGG CTGTTGGCGC CGACCGAAAA CTGAGCCACT TTTGA
|
|---|
| Protein sequence | MLKLEARPEA SRLFVFGSPL LALAITVLIG VLLFAALGKD PVRGLQVFFW EPIKSPYALG
ELAVKATPLL LIALGLAVCF RSNVWNIGAE GQFVIGAVAA GGVAVGADRK LSHF
|
|---|
| |