Gene Ajs_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3064 
Symbol 
ID4670870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3232323 
End bp3232814 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID639840110 
Producthistidine triad (HIT) protein 
Protein accessionYP_987270 
Protein GI121595374 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.284602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG CTGAGAGCTC AAGCGATACA CGACCCTGGA CGACTGCGAT GACCAATGCC 
ACTGAAACGA AATTCGGCGA TCCTGCCACA CGCCTCGCGC AGACGGACTG CTGGACGCTG
CTGCTGCGCC CCAAGCAGCC CACGCTGGGT GCCCTGGTGC TGGTGTGCCG CGAACCCGTC
CAGGCCTTCG CCGACGTGAG CGCGAAGGCC TTCGCGGAAA TGCAGGGCAT GGTGCAGCGC
ACCGAGGCCG CGCTGCGCGA CGTGGTGGGC TACGAACGCA TCAACTATTT GATGCTGATG
ATGGTCGACC CCGACGTGCA CTTCCACGTG ATCCCTCGCT ACGACGGCGC GCGCACCTTC
GAAGGCGTGG CCTTTCCCGA CGCCGGCTGG CCCGGCCCGC CGGCGCTGGA CGCGGCCGTC
ACGCTCGACG CCACGATGAC CGCCCGACTG AGTGCCGCCC TGCGCGAGGC CCTGCAGCGC
ACCGCTCCCT GA
 
Protein sequence
MSDAESSSDT RPWTTAMTNA TETKFGDPAT RLAQTDCWTL LLRPKQPTLG ALVLVCREPV 
QAFADVSAKA FAEMQGMVQR TEAALRDVVG YERINYLMLM MVDPDVHFHV IPRYDGARTF
EGVAFPDAGW PGPPALDAAV TLDATMTARL SAALREALQR TAP