Gene Ajs_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3062 
Symbol 
ID4670757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3230173 
End bp3231330 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content71% 
IMG OID639840108 
Producthypothetical protein 
Protein accessionYP_987268 
Protein GI121595372 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.328379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA ATACGGCGCC CACCCAGCGC GTTGCGGGGA TCGTCGTCGG CCAATCGCCC 
TTGCGTGTCT GGGGCCTTAC CTCGGAGGCG CGGTTGCAGC GCCAGTTCGC GCGCGCCGGT
GTGGCTGCGA CACCGGCCGA TGCCGACCGC GTCGTGCTGC TGCGCGCCGA CTGGGTGTTC
GACGAGGCGC TGGTGCGCGG CCTTGCCGGT GCGACGGACG ACGTCGCCCT GCGTGCTGGC
GATGGCGATG GCGATGGCGA TGGCGATGGC GATGGCGAGG TGGTCGCGCT GTCCGTCGCG
GCCGCGCAGG CCGCCGAAGC CGCCCGGCGG CTGGCCGAGC GGCAAGCGCT GGCCGGTGCA
CGCACCGTGT CGCCAGCGCA GATCGCCGAC GGCTACAACG ACAAGCTGCG CAAGCGCGAA
CCGCCCTACC TGCTGCCGCT GACTGCGGAG AGCATGGACG CCATCGAATG GCGCACCTTC
CGCGGCGCCT ACAAGGGTGT GACCGACCTG GTCACGCTCT ACGCCTGGCC GCGGCCGGCG
CGTTATGTCA CGCGGCTGTG CGCCGAAGCC GGCATCACGC CGAACCAGGT GACCTCGCTC
AGCCTGGTGC TGGTGCTGGC CGCGATGTGG CTGTTCTGGA CCGGGCACTA CGGCTGGGGA
CTCGCGGCCG CCTGGGGCAT GACCTTCCTC GACACGGTGG ACGGCAAGCT GGCGCGCGTC
ACGCTGAACT CGTCGCGCTT CGGCGACTTC TTCGACCATT CCATCGACCT GGTCCATCCG
CCGTTCTGGT GGTGGGCCTG GATCGTCGGG CTGACGGCCG TCGGCCTGCC CCTGACGCAT
GCGGCGCTGG CGCTCACGGC CATCGTCGCG GGCTACGTGC TGCAGCGGCT GGAAGAAGGC
CTGTTCATCG CGTGCTTCGG CATCGAGATG CACGTGTGGG AGCGCTTCGA CAGCCGCTTC
CGGCTCATCA CCGCGCGCCG CAACCCGAAC CTGCTGCTGC TGACCGCGTC CCTTCCCTTC
GGCCGTCCCG ACCTCGGCAT CCTCGCCGTG GCGATCTGGA CCGTCGCCTG CCTGGCCGTG
CATGCCGTGC GGCTGCTGCA GGCCGCCGTG GCGCGCCGCC GCGGCCCGCT GCGCTCCTGG
CTTTCGGCCT CGACGTGA
 
Protein sequence
MSANTAPTQR VAGIVVGQSP LRVWGLTSEA RLQRQFARAG VAATPADADR VVLLRADWVF 
DEALVRGLAG ATDDVALRAG DGDGDGDGDG DGEVVALSVA AAQAAEAARR LAERQALAGA
RTVSPAQIAD GYNDKLRKRE PPYLLPLTAE SMDAIEWRTF RGAYKGVTDL VTLYAWPRPA
RYVTRLCAEA GITPNQVTSL SLVLVLAAMW LFWTGHYGWG LAAAWGMTFL DTVDGKLARV
TLNSSRFGDF FDHSIDLVHP PFWWWAWIVG LTAVGLPLTH AALALTAIVA GYVLQRLEEG
LFIACFGIEM HVWERFDSRF RLITARRNPN LLLLTASLPF GRPDLGILAV AIWTVACLAV
HAVRLLQAAV ARRRGPLRSW LSAST