| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3057 |
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| Symbol | |
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| ID | 4670686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3224439 |
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| End bp | 3226154 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639840103 |
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| Product | ABC transporter related |
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| Protein accession | YP_987263 |
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| Protein GI | 121595367 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.539109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.512176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG CCTTCGTGCG CGCCTATCCC GGTCGCAGCC TGGCCGCGCT CGCCGCGGTC
TTCGTCGCGG GGCTGCTCGA CGGCCTCGGC ATGTCGATGC TGCTGTCGAT GCTCACGCTC
ACGACCGCCG ACGATCCGGG CCGCAAGCCC TCCATGCCCG AGCAGGTCGC CACGCGCATC
GCCGATGTCC TCGGCCTGCA GCCGACCGCG CCGGTCATGC TCACGCTGGC GATCGCGCTG
ATCGCGCTGC GTGCCGGACT CACGCTGGTG GCCAACAAGC AGGTCGGCTA CACGGTGGCG
CACATCGCCA CCGACCTGCG CCTGGCGCTG ATCCGCGCGG TGATGGGCGC GCGCTGGAGC
CATTACCTGC AGCAGTCGGT CGGCCGGCTG TCGAACGCGG TCGCCACCGA GGCGCAGCGT
GCCTCCGAAG CCTTCCAGTA CAGCGCCGAG ATGGCGGCGA TGCTGCTCAA TTCGCTGATC
TACATGGGCA TCGCGCTGGC GATCTCGTGG CAGGCGGGCG TGGCCACGGC GATTGCCGGC
GGCCTGCTGC TGACGCTGCT GCACACGCTC ATCCGCAGCT CGCGCCGCGC GGGTCAGCAC
CAGACGCAGC TCTTGACCTC GCTGCTGTCG GCCATCGGCG CGCAGCTGGC CGCGGCCAAG
CCGCTCAAGG CGATGGCGCG CGAAGACCAC GTCGATGCGC TGCTGTCGGA CCAGATGAAG
CAGTTGCGCC GCGCGCTGCG CCGCCAGGTG GTCAGCCGCG AAGCGCTCAG CGCGCTGCAG
GACCCGCTGC TCGCCATCAT GGTCGGCACC GGCTTCTTCC TGAGCCTGGT GGTGCTGAAG
ATGCCGCTGG CGTCGGTGCT GGTCATGCTC TTCCTGCTGG CGCGGGTGGT GAGCTATCTC
TCGAAGACGC AGCGCGCGTA CCAGCAGATC GTCGTGCGCG AGAGCGCCTA TTGGGCCCTC
ATCGACGGCA TCGACGCCGC GCATGCGCAG GCCGAGCCGA AGGGCGGCGA CCGCACGGCG
ACGCTGTCCG ACGGCATCGC GTTCGACGGC GTGCGCTTCC GCCACGGCGA CGGCCGCCTG
GTGCTCGAGG ACGCGTCCTT CACCATCCAC GCGCGCGAGC TGACCGTTGT CGTCGGCCCC
TCGGGCGCCG GCAAGACCAC GATGCTCGAC CTGGTGGTCG GCCTGCTGCA GCCGGAGGCC
GGCAGCGTGC GCGTCGATGG CGTGCCGATG CCCGAGCTGG CCCTGCGCCC CTGGCGCCGG
CAGATCGGCT ACGTGCCGCA GGACTCGGTG CTGGTCAACG AATCCATCGC CTACAACCTC
GCGCTGGGCG AGCAGGACCT GAGTGAGGCC GACCTGCGCG ATGCCCTGCG TGCCGCCGAT
GCGCTCGACT TCGTCGACGC CATGCCCGAG GGCCTGCAGA CGCGGGTGGG CGAGGGCGGA
TCGCGCCTGT CCGGCGGCCA GCGCCAACGC CTGGCCATCG CGCGGGCGTT GGTGCACAAG
CCCAGCCTGC TGGTGCTCGA CGAAGCCACC AGCAGCCTCG ACGCCGAGGC CCAGGCCGTG
GTGATCGACA CCGTGCGGCG CCTCAAGGGC TACCTGACCA TCCTGGCCGT GGCGCATCAG
GGCCTGCTGA TCGACGCGGC CGACCGGATC TACCGGCTGG CCGATGCAGA GGTGAGTCTG
GTGCGCGGTC CGCAGGAGCC AGAGGGGGAC GCATGA
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| Protein sequence | MIAAFVRAYP GRSLAALAAV FVAGLLDGLG MSMLLSMLTL TTADDPGRKP SMPEQVATRI
ADVLGLQPTA PVMLTLAIAL IALRAGLTLV ANKQVGYTVA HIATDLRLAL IRAVMGARWS
HYLQQSVGRL SNAVATEAQR ASEAFQYSAE MAAMLLNSLI YMGIALAISW QAGVATAIAG
GLLLTLLHTL IRSSRRAGQH QTQLLTSLLS AIGAQLAAAK PLKAMAREDH VDALLSDQMK
QLRRALRRQV VSREALSALQ DPLLAIMVGT GFFLSLVVLK MPLASVLVML FLLARVVSYL
SKTQRAYQQI VVRESAYWAL IDGIDAAHAQ AEPKGGDRTA TLSDGIAFDG VRFRHGDGRL
VLEDASFTIH ARELTVVVGP SGAGKTTMLD LVVGLLQPEA GSVRVDGVPM PELALRPWRR
QIGYVPQDSV LVNESIAYNL ALGEQDLSEA DLRDALRAAD ALDFVDAMPE GLQTRVGEGG
SRLSGGQRQR LAIARALVHK PSLLVLDEAT SSLDAEAQAV VIDTVRRLKG YLTILAVAHQ
GLLIDAADRI YRLADAEVSL VRGPQEPEGD A
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